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SCNpilot_cont_300_bf_scaffold_250_curated_64

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(75151..76698)

Top 3 Functional Annotations

Value Algorithm Source
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 523.0
  • Bit_score: 963
  • Evalue 1.20e-277
lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 523.0
  • Bit_score: 955
  • Evalue 5.50e-276
Lysine--tRNA ligase n=1 Tax=Variovorax sp. CF313 RepID=J2TI40_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 523.0
  • Bit_score: 963
  • Evalue 8.40e-278

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1548
ATGTCCGATCAAAAGACCCCTACGCCTCCCACGCCCGCCGTCGACGAAAACCAGCTCATCGCCGAACGCCGCGAAAAACTCAAGCTGCTGCGCACCGCGCAGGTCGAGGGCAAAGGCGTTGCGTTCCCTAACGACTTCAAGCCTGGCCACCGCGCCGCGGCACTCGTCGAGGCACATGGCGCCACCGAAGCCGAAGCCCTCGAGGCACAAGCCGTTGCCGTGAGCGTGGCGGGCCGGATGATGCTCAAGCGCGTCATGGGCAAGGCCAGCTTCGCGACGCTGCAGGACGCCACCAGCCGCATCCAGCTCTACGTCACGCGCGACGCGGTGGGCGAAGAGGCGTATGCCGAATTCAAGCGCTGGGACTTGGGCGACATCGTCGGCGCCGAAGGCACGCTGATGAAGACCAAGACCGGCGAGCTGTCGATCAAGGTCACGCAACTGCGCCTGCTTACCAAGAGCCTGCGCCCGCTGCCCGACAAGTTCCACGGCATGGCCGACCAGGAGCAGAAGTACCGCCAACGCTACGTCGACCTGATCACAGACGAATCGGCACGCGTGCGCTTCACCGCGCGCAGCAAGGCCGTGAGCGCGCTGCGCGAGTTCATGGTGGCCAACGACTTCCTCGAAGTCGAAACGCCCATGCTCCACCCCATTCCCGGCGGCGCCAACGCCAAGCCGTTCAAGACGCATCACAACGCGCTCGACCAGGAAATGTTCCTGCGCATCGCGCCCGAGCTCTACCTCAAGCGCCTGATCGTCGGCGGCTTCGAGCGCGTGTTCGAAATCAACCGGAGCTACCGCAACGAGGGCATCTCGGTGCGGCACAACCCCGAGTTCACGATGATGGAGTTCTACGCGGCCTACTGGAACTACCGCGACCTGATGGACTTCACCGAGACGCTGATCCGCACCATCGCCGACAAGGCGGTGGGCACGCAGCAGCTCACCTATGGCGGCAAGCCGGTCGACCTGACCCAGCCCTTCGAGCGCCTGACGATCCGCGAAGCGATCCTGAAGTACACCGATGCCGAAGGCGTGGCGCAGGGCGTGGACGACACCGCCTGGCTCATCGCCGCCCTGCGCAAGATCGGCCTGAGCGAAGAAAAGGACAAGCTCTCGCAGCGCAGCCTGGCCAGCCTGCAGGTGATGTACTTCGAGGAAACCGTCGAAGAGAAGCTCTGGCAGCCGACCTTCATCATGGAGCACCCGACCGAGATCTCGCCGCTGGCGCGCGCCAACGACGAGCGCCCCGAAGTCACCGAGCGCTTCGAGCTGTACATCACCGGCCGCGAATTCGGCAACGGCTTCAGCGAGCTGAACGATGCCGAGGACCAGGCAGCGCGCTTCAACGCGCAGGTCGCGGCCAAGGATGGCGGCGACGACGAAGCCATGTACTACGACCACGACTTCGTGCGCGCGCTCGAATACGGCATGCCGCCCACCGGCGGCTGCGGCATCGGCATCGACCGGCTGATGATGCTGCTGACCGATTCGCCGAGCATCCGCGACGTGATCCTGTTCCCCGCCCTGCGCAGGGAATCTTGA
PROTEIN sequence
Length: 516
MSDQKTPTPPTPAVDENQLIAERREKLKLLRTAQVEGKGVAFPNDFKPGHRAAALVEAHGATEAEALEAQAVAVSVAGRMMLKRVMGKASFATLQDATSRIQLYVTRDAVGEEAYAEFKRWDLGDIVGAEGTLMKTKTGELSIKVTQLRLLTKSLRPLPDKFHGMADQEQKYRQRYVDLITDESARVRFTARSKAVSALREFMVANDFLEVETPMLHPIPGGANAKPFKTHHNALDQEMFLRIAPELYLKRLIVGGFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTETLIRTIADKAVGTQQLTYGGKPVDLTQPFERLTIREAILKYTDAEGVAQGVDDTAWLIAALRKIGLSEEKDKLSQRSLASLQVMYFEETVEEKLWQPTFIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELNDAEDQAARFNAQVAAKDGGDDEAMYYDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVILFPALRRES*