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SCNpilot_cont_300_bf_scaffold_250_curated_68

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(79072..79917)

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 281.0
  • Bit_score: 527
  • Evalue 9.00e-147
trpA; tryptophan synthase subunit alpha; K01695 tryptophan synthase alpha chain [EC:4.2.1.20] similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 280.0
  • Bit_score: 514
  • Evalue 1.80e-143
Tryptophan synthase alpha chain n=1 Tax=Variovorax sp. CF313 RepID=J3CU09_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 281.0
  • Bit_score: 527
  • Evalue 6.40e-147

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGAGCCGCATTGCAGCAACCTTCGACGCGCTGAAGAAAGACGGCCGCCGCGCCCTCGTTCCGTACGTCACCGCGGGCTTTCCCTTCGCCGACATCACGCCCGAGCTGATGCACGGCATGGTCGAGGCCGGCGCCGACGTGATCGAACTCGGCGTGCCCTTCTCCGACCCGATGGCCGACGGCCCCGTGATCCAGAAGGCCGGCGAGGCCGCGCTGGCGCTGGGCATCGGCATGAAGCAGGTGCTGGCCATCGTCGCCGCTTTCCGCCAGAAGAACGCGACCACGCCCGTGGTGCTGATGGGCTATGCGAACCCGGTCGAGCGCTACGACCTCGTGCACGGCAAGCAGGCCTTCATCCGCGACGCGGCCGCCGCCGGCGTGGACGGCCTGCTGGTCGTCGACTACCCGCCCGAAGAGTGCGAAGCCTTTGCCGCCGACCTCAAGGCCGCCGGCATCGACCTGATCTTCCTGCTTGCACCCACCAGCACCGACGAGCGCATGGCGCAGGTCGCGCGCATCGCCAGCGGGTACGTCTACTACGTGTCGCTCAAGGGCGTGACGGGTGCCGGCCATCTCGACGCCGAAGCGGTCGGCCAGATGATTCCGCGCATCCGCCAGCACGTGGGCATTCCGGTCGGCGTGGGCTTCGGCATCCGCGATGCACGCACCGCGCAGGCCGTGGGATCGGCCGCCGACGCGGTCATCATCGGCACCAAGATCATTCAACTCATCGAAGACCAGCCCCGCGACAAGGTCGTGCCGGCCGTGCGTGAATTCCTCGCGGGCATCCGCGAGGCGCTCGACGCGCTGCCCGCCGCGACGGCCAAGAACGCGGCTGGTCGATAA
PROTEIN sequence
Length: 282
MSRIAATFDALKKDGRRALVPYVTAGFPFADITPELMHGMVEAGADVIELGVPFSDPMADGPVIQKAGEAALALGIGMKQVLAIVAAFRQKNATTPVVLMGYANPVERYDLVHGKQAFIRDAAAAGVDGLLVVDYPPEECEAFAADLKAAGIDLIFLLAPTSTDERMAQVARIASGYVYYVSLKGVTGAGHLDAEAVGQMIPRIRQHVGIPVGVGFGIRDARTAQAVGSAADAVIIGTKIIQLIEDQPRDKVVPAVREFLAGIREALDALPAATAKNAAGR*