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SCNpilot_cont_300_bf_scaffold_190_curated_11

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 10211..11623

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8T4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 470.0
  • Bit_score: 867
  • Evalue 5.70e-249
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 470.0
  • Bit_score: 867
  • Evalue 1.80e-249
Putative transmembrane protein {ECO:0000313|EMBL:ADU36156.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 470.0
  • Bit_score: 867
  • Evalue 8.00e-249

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGCAAAAAACGATCCGACTGACTGCAGCCGCGGTATTGCTGCTCCTGCTTCCCGCCCTGGCCACGGCCGCCGACTTCGACGGCGGAAAACTGTCGCCGCTGTGGGGCGTGCCCTTCGCGGGCATCCTGCTGTCGATCGCGTTGTTCCCGCTGCTCGCGCCGGCGTTCTGGCACCACCACTACGGCAAGATCTCGGCAGCCTGGGCGCTGGCCTTCCTGCTGCCCTTCGCCGCCACCTACGGCGCGGCGCTGGCCGGCGAGCAACTGGTGCATGCGCTGGTGGCCGAGTACATCCCCTTCATCATCCTGCTCACGGCGCTGTTCACCGTGGCGGGCGGCATTCACATTCGCGGCAACCTGCGCGGGGCGCCTGGCCTGAACACGGCGATCCTCGCCATCGGCGCGGTGCTTGCGAGCTTCATGGGCACCACGGGCGCGTCGATGCTGCTGATACGGCCGCTGATTCGCGCCAACGACAACCGCGCGCACAGAGTGCATGTGATCGTGTTCTTCATCTTCATCGTGTCGAACGCAGGTGGCTCGCTCACGCCGCTGGGCGATCCGCCGCTGTTCCTCGGCTTCCTGAAAGGTGTCGGCTTTTTCTGGACCGTGCAGAACATCCTGCCCGAAACGATCTTCATCCTGGGCGTTCTGCTGGCGCTGTTCTACCTGATCGACCGCCATTACTACCGCAAGGAAGGCGTGCTGCCGGTCGACCCGACGCCCGACACGCCGGGCATCGGCTTCGACGGCGCCTCCAACTTCTGGCTGCTGGGCGGCATCGTCGCGCTGGTGCTGATGAGCGGCTTCTGGAAGTCGCCCGTGGTGTTCGACGTGTTCGGCACCGAGGTCGGCCTGCCGGGCCTGCTGCGCGACGCGGGGCTGCTGCTGATCGCTGTGGTCTCTTACAGGCTCACGGCACCCAAGGTGCATGCCGACAACCAGTTCGAATGGGGCCCGATGGCCGAAGTGGCCAAGCTGTTCGCGGGCATCTTCCTGACCATCATCCCGGTGATCGCCATGCTCAAGGCCGGCACGCAGGGGCCGTTCGGCGCCATCGTCTCGGCCGTGACGCGCGCCGACGGACAGCCCGATCCGGCGATGTATTTCTGGGCCACCGGCGTGCTGAGCTCGTTCCTCGACAACGCGCCGACCTACCTGGTGTTCTTCAACACTGCGGGCGGCGACCCGGCCGCGCTGATGACCACCTACGCCAGCACGCTGGCCGCCATCTCGGCGGGGGCCGTGTTCATGGGCGCCAACACCTACATCGGCAACGCGCCCAACCTCATGGTCAAGGCCATCGCCGAGAGCCGCGGCGTGCGCATGCCGAGCTTCTTCGGCTACATGGCGTGGTCGGTGACCATCCTGGTGCCGCTGTTCGTCATTTGCACCTTCATCTTCTTCCGCTGA
PROTEIN sequence
Length: 471
MQKTIRLTAAAVLLLLLPALATAADFDGGKLSPLWGVPFAGILLSIALFPLLAPAFWHHHYGKISAAWALAFLLPFAATYGAALAGEQLVHALVAEYIPFIILLTALFTVAGGIHIRGNLRGAPGLNTAILAIGAVLASFMGTTGASMLLIRPLIRANDNRAHRVHVIVFFIFIVSNAGGSLTPLGDPPLFLGFLKGVGFFWTVQNILPETIFILGVLLALFYLIDRHYYRKEGVLPVDPTPDTPGIGFDGASNFWLLGGIVALVLMSGFWKSPVVFDVFGTEVGLPGLLRDAGLLLIAVVSYRLTAPKVHADNQFEWGPMAEVAKLFAGIFLTIIPVIAMLKAGTQGPFGAIVSAVTRADGQPDPAMYFWATGVLSSFLDNAPTYLVFFNTAGGDPAALMTTYASTLAAISAGAVFMGANTYIGNAPNLMVKAIAESRGVRMPSFFGYMAWSVTILVPLFVICTFIFFR*