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SCNpilot_cont_300_bf_scaffold_190_curated_21

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 20914..22881

Top 3 Functional Annotations

Value Algorithm Source
excinuclease ABC subunit C n=1 Tax=Variovorax paradoxus RepID=UPI00036410B1 similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 655.0
  • Bit_score: 1239
  • Evalue 0.0
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 655.0
  • Bit_score: 1227
  • Evalue 0.0
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 655.0
  • Bit_score: 1216
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1968
ATGTCAGACGTGCATTCCGATCAATTGCTCAGCGAAGTCGCGGCCCTGCCGCAGCTGCCCGGTGTCTATCGCTATTTCGACGCCGCGGGCGCAGTGCTGTACGTGGGCAAGGCGCGCAATCTCAGGAAGCGGGTCGCCAACTACTTCCAGAAGAATCACGGCGGCACCCGCATCGGTCACATGATCTCGAAGATCGTGCGCATGGAGACCACCGTGGTGCGCTCCGAGGCCGAGGCGCTGCTGCTCGAGAACAACCTGATCAAGACGCTCAAGCCGCGCTACAACATCCTGTTTCGCGACGACAAGAGCTACCCCTATCTGAAGATCGCGTCGCACCAGTTTCCGCGGCTGGCCTACTACCGCGGCGCGGTCGACAAGAAACACCGCTATTTCGGGCCGTACCCCAGCGCATGGGCGGTGAAGGAGTCGATCCAGTTGCTGCAGAAGGTGTTCCGCCTGCGCACCTGCGAAGACACGGTGTACGCCAACCGCACGCGGCCCTGCCTGCTCTACCAGATCAAGCGGTGCAGCGGGCCGTGCGTCGGCCACATCGCGCCCGACGCCTATGCGCAGGACGTCGCCAGCGCCGAGGCCTTCCTGATGGGCGACACCCAACTCGTGCTCTCGAAGCTGGAGCAGCGCATGATGACGCACGCCGAGAAGCTCGAGTTCGAGCAGGCGGCCGAGCTGCGCAACCAGATGTCGGCCATCTCGCGCGTGCTGCACCAGCAGTCGATCGAGATCGCCTCAGACAAGGACGTGGACATCCTGGCCGTGAAGGTGCAGGGCGGCAAGGCCTGCGTGAACCTGGCCATGGTGCGCGGCGGCCGCCACCTGGGCGACCGGCCCTACTTTCCCGTGCACGTGGAAGACGCGGTGCAGATCCATCACGGCGAGCTGGACGGCGACGAGGGCGACGATGCCGGTCCCGCCGCGGCCGACCCGATCGAGGTGCAGGTGCTCGAGGCCTTCATCGCCCAGCACTACATCGACGTGCCGGTGCCGGCCACGCTGGTGCTGAGCCAGCAGGTGAGCCGCGAGCTGATCGAGGCGATCTCGCAGCAGGCGGGCTCGCGCGTGACGGCCGTGTTCCAGCCGCGCGAGCAACGCCGGCACTGGCTCGAGATGGCCGAGACCAATGCCGGCCTGCAGCTGGCCCGGCTGCTGGCCGAAGAGGGCTCGCAGCAGGCGCGCACCCGCGCGCTGACCGACGCGCTCGAGCTGGCCTCGGACGACCTCGACACCTTCCGGGTCGAATGCTTCGACATCTCGCACACCGCGGGCGAGGCCACGCAGGCTTCGTGCGTGGTGTTCGAACACCACGCCATGCAGAACAAGGAGTACCGCCGCTACAACATCGAGGGCATCACGCCCGGCGACGACTATGCGGCCATGCGCCAGGTGCTGCACCGCCGCTACGGCAAGCTGGCCGAGGCGATGGCCGCCGAGACCGACGCGCTGCCCCCCGGCGACGCCGAGAGCGAGAGCGCCGACGCACCCCCGAAGCCCCGCACCGCGCGCATGCCCGACCTGGTGCTGGTCGACGGCGGCAAGGGCCAGGTGTCGATGGCGCGCGAGGTGTTCGGCGAACTGGGCCTGCCGCTGTCGTTGATCGTCGGCGTCGAGAAGGGCGAGGGTCGCAAGGTCGGGCTCGAGGAACTGGTGTTCGCCGACGGCCGCGAGAAGGTCTACCTGGGCAAGGACTCGGCCGCGCTGATGCTGGTCGCCCAGATCCGCGACGAGGCGCACCGCTTCGCCATCACCGGCATGCGCGCCAAGCGCGCCAAGGTGCGCGTGGGCGGCAGCCAGCTCGAAGATATTCCGGGCATCGGGCCGAAGCGGCGGGCGCGGCTGCTGCAGCGCTTCGGCGGCATCCGCGGCGTGGCCGCGGCGAGCGTGGAAGACATTGCCTCGGTGGAGGGCATCGCCTCCGACCTGGCGGAAGAGATCTACAAGGCGCTGCACTGA
PROTEIN sequence
Length: 656
MSDVHSDQLLSEVAALPQLPGVYRYFDAAGAVLYVGKARNLRKRVANYFQKNHGGTRIGHMISKIVRMETTVVRSEAEALLLENNLIKTLKPRYNILFRDDKSYPYLKIASHQFPRLAYYRGAVDKKHRYFGPYPSAWAVKESIQLLQKVFRLRTCEDTVYANRTRPCLLYQIKRCSGPCVGHIAPDAYAQDVASAEAFLMGDTQLVLSKLEQRMMTHAEKLEFEQAAELRNQMSAISRVLHQQSIEIASDKDVDILAVKVQGGKACVNLAMVRGGRHLGDRPYFPVHVEDAVQIHHGELDGDEGDDAGPAAADPIEVQVLEAFIAQHYIDVPVPATLVLSQQVSRELIEAISQQAGSRVTAVFQPREQRRHWLEMAETNAGLQLARLLAEEGSQQARTRALTDALELASDDLDTFRVECFDISHTAGEATQASCVVFEHHAMQNKEYRRYNIEGITPGDDYAAMRQVLHRRYGKLAEAMAAETDALPPGDAESESADAPPKPRTARMPDLVLVDGGKGQVSMAREVFGELGLPLSLIVGVEKGEGRKVGLEELVFADGREKVYLGKDSAALMLVAQIRDEAHRFAITGMRAKRAKVRVGGSQLEDIPGIGPKRRARLLQRFGGIRGVAAASVEDIASVEGIASDLAEEIYKALH*