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SCNpilot_cont_300_bf_scaffold_190_curated_31

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(31189..31437)

Top 3 Functional Annotations

Value Algorithm Source
Transglycosylase-associated protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8V5_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 82.0
  • Bit_score: 154
  • Evalue 4.40e-35
transglycosylase-associated protein similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 82.0
  • Bit_score: 154
  • Evalue 1.40e-35
Variovorax paradoxus strain MEDvA23 contig_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33595.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 82.0
  • Bit_score: 154
  • Evalue 6.10e-35

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGAGCATCGTCTGGACTATTCTGATCGGGTTCGTCGTGGGTCTGGTGGCACGCGCCGTCAAGCCGGGGGACGATTCCGCGGGCTTCATCGTCACCACGATCATCGGCATTGCCGGCTCCCTGATCGCAACCTACATCGGCCAATCGATGGGCTGGTACATCGCCGGCCAAGGCGCAGGCTTCATCGCTTCCGTGCTGGGCGCGATCGTGCTGCTGATCCTTTACGGCCTGATCAAGCGCAAGAGCTGA
PROTEIN sequence
Length: 83
MSIVWTILIGFVVGLVARAVKPGDDSAGFIVTTIIGIAGSLIATYIGQSMGWYIAGQGAGFIASVLGAIVLLILYGLIKRKS*