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SCNpilot_cont_300_bf_scaffold_190_curated_37

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 35747..36658

Top 3 Functional Annotations

Value Algorithm Source
lipoprotein NlpD n=1 Tax=Variovorax paradoxus RepID=UPI00036EA20A similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 303.0
  • Bit_score: 550
  • Evalue 1.30e-153
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:EJL77649.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 305.0
  • Bit_score: 545
  • Evalue 3.50e-152
peptidase m23; K06194 lipoprotein NlpD similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 306.0
  • Bit_score: 540
  • Evalue 4.30e-151

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGCAGGGTATTGGCAATCGGAGTTGGTTCGCTGGCATCACGTTGGCTTTTGTGCTCGTGATCGCGGGCTGTTCCACGCCGCGCGGGCCCGCGCCGGTTGAAGATCGCGGCACCATGACGCGCGCCCCGGCCCCCAGCACGGTTCCTGGCGGCCCACCCATCACCACCGATGCCAACGGCAAGCCGCTCGCCGGCATTGAAAACTACGGCAAGCCCGGCTACTACGCGGTTCGTCCGGGCGACACCATCCGCCGCATCGGCATCGAGACAGGACAGCGCTGGCAGGACATCGTCCGCTGGAACAACATCGACAACCCCGACCTGATCGAAGTCGGCCAGGTGCTCCGGGTAATTCCCCCGACCGGTTCGGGTACTTCCGTCGCTGTTGCGCCTCCGCCTTCGAGCGGTTCCGAAGGCGCGGTCACGAAGCCGGTGACACCGCCTCCCGTCATCGCACCGGTAACGCCATCGACCGGAGCCACCAAGCCGCCGGCTCCTGTCACCGCATCTCCGGCGAGCCCTGGCAGCGGCGCATCGGGTGACGAAGACCTCGGCTGGATCTGGCCCGCGAGCGGTTCGCTGATCGCCGGTTTCGACGAAGCCAAGAATAAGGGCTACGACATCAGCGGCAAGGCGGGCGATCCAGTGCTGGCCGCGGCCGACGGCCGTGTGGTCTATGCCGGTGCCGGCCTGCGCGGCTACGGCAACCTGATCATCCTGAAGCACAACAACACCTACCTGACCGCGTATGCGCACAACCAGACGCTGCTCGTGAAGGAAGACCAGTCGGTTCAGAAGGGCCAGAAGATCGCCGAAATGGGCAGCAGCGATGCCGATCGCGTCAAGCTGCACTTCGAGATCCGCCGCCAGGGCAAGCCCGTCGATCCCTCGCGCTACCTGCCCAGCCGGTGA
PROTEIN sequence
Length: 304
MQGIGNRSWFAGITLAFVLVIAGCSTPRGPAPVEDRGTMTRAPAPSTVPGGPPITTDANGKPLAGIENYGKPGYYAVRPGDTIRRIGIETGQRWQDIVRWNNIDNPDLIEVGQVLRVIPPTGSGTSVAVAPPPSSGSEGAVTKPVTPPPVIAPVTPSTGATKPPAPVTASPASPGSGASGDEDLGWIWPASGSLIAGFDEAKNKGYDISGKAGDPVLAAADGRVVYAGAGLRGYGNLIILKHNNTYLTAYAHNQTLLVKEDQSVQKGQKIAEMGSSDADRVKLHFEIRRQGKPVDPSRYLPSR*