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SCNpilot_cont_300_bf_scaffold_190_curated_208

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 210524..211681

Top 3 Functional Annotations

Value Algorithm Source
ABC-type multidrug transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J2K9F3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 384.0
  • Bit_score: 703
  • Evalue 9.00e-200
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:EJL76885.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 384.0
  • Bit_score: 703
  • Evalue 1.30e-199
ABC transporter; K09686 antibiotic transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 384.0
  • Bit_score: 673
  • Evalue 3.10e-191

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
ATGCTCCTCGCGCTCATCAGAAAAGAACTGCTCGCCCTCGTGCGCGACATGCACGGGCTGGCCGCGCTGTTCGTGATGCCGATGGTCTTCATCGTGCTGATGTCGCTCACGCTGAAAGACATCTATCGTCCGCCGCTCGCCGAGCTGACTTACGCCATCGACATGCGCGACACCGCCACGCCAGCCCAGTGGCTCAAGCAGCTCTGGCAGCGCAATCATGGCGCGCCGCAGCCGCTGGGCGACGACTGGCAGGCGCGGCTTCGCAACGGCTCGCTCAAGTACGTGATCGTGATGGAGCAGGGGCTGTCGGAAGAGCTGGAGTCGGCGGCGCTGTCGACCCAGGCGCGCGTCCATCTGCTGACCGAGCCGGGCATCGACGCCAACCTGTTCAATGCGCTGCGCGCCGAGCTGGTCGGCGCGTCGGGCGAACTCAAGGCGCGGCTCGCGCTGGCGGTGCCCGGCACGGCCGGCCCGGCGCCCGACGCGTCGATCCAGGCGATGGTGCGCGCCGAGCGCTTCTCCACCGCCGGGCCGCGCCCGACCTCGGTGCAGCAGAACGTGCCCGCATGGCTGGTGTTCGGCATGTTCTTCGTGGTCGCGTCGCTCTCGAGCCTGTTCGTGCAGGAGCGCAGCTCGGGCGCGCTCGGCCGGCTGCAGAGCCTGGGCGTCTCGCGCTTCACGCTGCTGGCGTCGAAGGCGTTGCCTTACCTCGGCGTGAACGCGCTGCAGGCGGTGCTGATGATCGCGGCCGGCATCTGGTTCATGCCGCTGATCGGCGGCGATGCGCTGTCGCTCGCGGGCATCCACTGGGGCGCGCTGCTGCTGTCGCTCGCGGCGGTGAGCCTGGCGGCGGTGAGCCTGTCGCTCGCGCTGGCCTGCCTGGTGCGCAGCCATGCGCAGGCCGCCACCATCGGGCCGATGGTCAACGTACTGATGGCCGCGGCCGGCGGCATCATGGTGCCCAAGTTCGTGATGCCGGGCTTCATGCAGCGGCTGGTCGAGATCTCGCCGATGAACTGGGGGCTCGAGGCCCTGCTCACCGTGCTTCTGCGCGGCGGCGGCGTGGCCGACGCCCTGCCGCAGATCGGCCGACTGGTCGTGTTCGCGGCGCTGATGTTCTTCATTGCCGTATTTCTGTTTCGCAGGCGCGCACCATGA
PROTEIN sequence
Length: 386
MLLALIRKELLALVRDMHGLAALFVMPMVFIVLMSLTLKDIYRPPLAELTYAIDMRDTATPAQWLKQLWQRNHGAPQPLGDDWQARLRNGSLKYVIVMEQGLSEELESAALSTQARVHLLTEPGIDANLFNALRAELVGASGELKARLALAVPGTAGPAPDASIQAMVRAERFSTAGPRPTSVQQNVPAWLVFGMFFVVASLSSLFVQERSSGALGRLQSLGVSRFTLLASKALPYLGVNALQAVLMIAAGIWFMPLIGGDALSLAGIHWGALLLSLAAVSLAAVSLSLALACLVRSHAQAATIGPMVNVLMAAAGGIMVPKFVMPGFMQRLVEISPMNWGLEALLTVLLRGGGVADALPQIGRLVVFAALMFFIAVFLFRRRAP*