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SCNpilot_cont_300_bf_scaffold_190_curated_270

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(296561..297226)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CRP4_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 31.9
  • Coverage: 210.0
  • Bit_score: 111
  • Evalue 8.70e-22
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16711.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 198.0
  • Bit_score: 257
  • Evalue 2.30e-65
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 210.0
  • Bit_score: 111
  • Evalue 2.70e-22

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
GTGAACGCCAACACGCCGGCTTCCACGGCCCAGACGGCGTTGCCCGACTGGGCGTTGCAGTCGGAGCCCGTGGAAGGCGTGCGCATCGACATCGCCTTCATCGTGGAGCCCTCGTTCTACTACGGCCCCTCGTCGCACATCTCGCCCGAACAATGGCGGAACCTGCGCGAGCCGCTTTACCAGCCGGCCATACCGGGGGCGGAACAGGGCTTCGTGCTGTCGGCCGACTGCGTTGGCCACGAGGAAGAACTCCACCGCCACTACCGCGACCTGCTCGCCAAAGCCGCGCAACGCGGCAAGAACATCGCCGACACCATCCATTTCTGGAACAGGCCGGTCGTCCACGCACCGGGGAGCTTTTTGCTGAGCTTTCCGTGGCACGACCGCTTCAGCGAGGGGCGAGCCTTCATCGAATCGTTGACGGCAGGCATGCCGGGCGAGGTCTTCTCCGATTACGAGCAAGGCTGGTTCTTCGACCTGAGGCTGCACGACGGCATGCTGTACTTGCGCGACGACGATCCCGACGAAGGCAAGACCTTCCACAACCTGCGCTTCGCCTACGCGCCCGTGCGCGCACAGGTCGAGACCGTGCTTGCGCGCGTCGAGCGCTTGATTGCCAGGCTGGCGGACGAATTCGGCCGCGACTACTGGACGGACGGCAACTGA
PROTEIN sequence
Length: 222
VNANTPASTAQTALPDWALQSEPVEGVRIDIAFIVEPSFYYGPSSHISPEQWRNLREPLYQPAIPGAEQGFVLSADCVGHEEELHRHYRDLLAKAAQRGKNIADTIHFWNRPVVHAPGSFLLSFPWHDRFSEGRAFIESLTAGMPGEVFSDYEQGWFFDLRLHDGMLYLRDDDPDEGKTFHNLRFAYAPVRAQVETVLARVERLIARLADEFGRDYWTDGN*