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SCNpilot_cont_300_bf_scaffold_53_curated_120

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(115121..115453)

Top 3 Functional Annotations

Value Algorithm Source
Thioredoxin n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZI8_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 110.0
  • Bit_score: 219
  • Evalue 1.50e-54
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 110.0
  • Bit_score: 220
  • Evalue 9.30e-55
thioredoxin; K03671 thioredoxin 1 similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 110.0
  • Bit_score: 219
  • Evalue 4.60e-55

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGGCCAGCGAACTCATCAAACACATCTCCGATTCCTCCTTCGAGGCCGACGTGCTCAAGTCCAGTCAGCCCGTCCTGGTCGACTACTGGGCCGAATGGTGCGGCCCCTGCAAGATGATCGCCCCGATCCTCGACGAAGTGTCCGCCACCTACGAAGGCAAGCTGCAAATCGCCAAGCTCAATGTCGACGAGAACCGCGACATCCCCGCCAAGTTCGGCATCCGCGGCATCCCCACGCTGATGCTGTTCAAGGACGGCCAGCTGGCCGCCACCAAGGTCGGCGCCATGAGCAAGGCGCAACTCACGGCCTTCATCGACCAGCAACTCGCCTGA
PROTEIN sequence
Length: 111
MASELIKHISDSSFEADVLKSSQPVLVDYWAEWCGPCKMIAPILDEVSATYEGKLQIAKLNVDENRDIPAKFGIRGIPTLMLFKDGQLAATKVGAMSKAQLTAFIDQQLA*