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SCNpilot_cont_300_bf_scaffold_53_curated_125

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 124964..125296

Top 3 Functional Annotations

Value Algorithm Source
Nucleoid-associated protein Varpa_2506 n=2 Tax=Variovorax RepID=E6V0K5_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 110.0
  • Bit_score: 218
  • Evalue 4.30e-54
hypothetical protein; K09747 hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 110.0
  • Bit_score: 218
  • Evalue 1.40e-54
Nucleoid-associated protein PMI12_04446 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 110.0
  • Bit_score: 218
  • Evalue 6.00e-54

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGTTCAACAAAGGACAACTGGCCGGCCTCATGAAGCAGGCGCAGGCAATGCAGGACAACCTCAAGAAGGCCCAGGAAGAGCTGGCCCACATCGAGGTCGAGGGTGAATCCGGCGCCGGTCTCGTCAAGGTCGTCATGACCTGCAAGCACGACGTCAAGCGCATCACCATCGATCCGAGCCTGCTGGCCGACGACAAGGACATGCTCGAAGACCTGGTGGCCGCCGCCTTCAACGCCGCCGTGCGCAAGGCCGAGGAAACCAGCGAGCAGAAGATGGGCAAGCTGACGGCCGGCATGCCCGGCCTCCCGCCCGGCATGAAGCTGCCGTTCTAA
PROTEIN sequence
Length: 111
MFNKGQLAGLMKQAQAMQDNLKKAQEELAHIEVEGESGAGLVKVVMTCKHDVKRITIDPSLLADDKDMLEDLVAAAFNAAVRKAEETSEQKMGKLTAGMPGLPPGMKLPF*