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SCNpilot_cont_300_bf_scaffold_180_curated_7

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(3583..4533)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2KIK0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 312.0
  • Bit_score: 580
  • Evalue 1.20e-162
Transcriptional regulator {ECO:0000313|EMBL:EJL72923.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 312.0
  • Bit_score: 580
  • Evalue 1.70e-162
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 312.0
  • Bit_score: 552
  • Evalue 1.10e-154

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGTCTCTTCCGCTTCTCAGCATCCCGATGCGGCACTTCCTCGAAGTGGCTCGCAGCGGCTCGGTCAACCAGGCGGCGGCGCGGCTCTATGTCGCGTCTTCGGCGGTGAGCCGGCAGATCGCCAAGCTCGAAGACAGCCTGGGCACGCCGCTGTTCGAGCGGCATGCGCGCGGCATGGCGCTCACGGCGGCAGGCGAGCGGCTGGCCGCGCACCTGCGCAATGCGCAGCTCGACATCGAACAGGTGGTCGAGCAGGTGCGCGACCTCGGCGGCCAGAGCGCGCGGCGCATCCGCATGGCGTGCACCGAAGGCTTCGCGGGCCACTTCATGCCGCTGGTGATGCGCAGCTTCGAGCAGGCGCACCCTGGCTGCCAGCTCGAACTGCACGTGGGCTCGCCCGACGGCGTGAGCGCGCTGCTGGCGCGTGGCGAGACAGACATCGCGCTCAAGTACGTGGTGGCGCCGGAGCCCGGCCTGGCAATAGCGCACGCCGCCACCGCGCCGGTGTACGCGGTGCTGCGGCCCGACCATCCCCTGGCACGCCAGCGCGTGGTGTCGGTGGCCGACGCGGTGCGCTACCCGCTGGCGGTGGGCGACAAGGGCGTCACCGCGCGCCAGTTGTTCGACCAGGCCTGCAGCCTGCAGGGGCTGCGCTATCACGCGATCTTCGTGAGCAATTTCTCGTCGGTGCTGCTGCCGCTGCTGCGCACGCCCGACGTGATGCTGTCGGGCCACCTCACGGTGATGCACCTGATCGACGCCGGCACGGTGGTGGCGCGGCCGTTCGCGGAAGCGCCGCTGCAGCAGCGGCAACTGCAGGTGCTGGCGCTCGAAGGCCGCACGCTGCCGCCGCTGGCGCAGGAGTTCGTGAAGCACCTGGTGGGCGCGATCGCCAGCGCGGGCCGGCGCAAGCTGGGCCGGGCGCGCGCGGGTGCGGCCGGCCCCGCCTGA
PROTEIN sequence
Length: 317
MSLPLLSIPMRHFLEVARSGSVNQAAARLYVASSAVSRQIAKLEDSLGTPLFERHARGMALTAAGERLAAHLRNAQLDIEQVVEQVRDLGGQSARRIRMACTEGFAGHFMPLVMRSFEQAHPGCQLELHVGSPDGVSALLARGETDIALKYVVAPEPGLAIAHAATAPVYAVLRPDHPLARQRVVSVADAVRYPLAVGDKGVTARQLFDQACSLQGLRYHAIFVSNFSSVLLPLLRTPDVMLSGHLTVMHLIDAGTVVARPFAEAPLQQRQLQVLALEGRTLPPLAQEFVKHLVGAIASAGRRKLGRARAGAAGPA*