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SCNpilot_cont_300_bf_scaffold_83_curated_144

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(151964..152866)

Top 3 Functional Annotations

Value Algorithm Source
symporter n=1 Tax=Variovorax paradoxus RepID=UPI000382A78B similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 300.0
  • Bit_score: 561
  • Evalue 4.30e-157
bile acid:sodium symporter; K03453 bile acid:Na+ symporter, BASS family similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 300.0
  • Bit_score: 554
  • Evalue 2.20e-155
Bile acid:sodium symporter {ECO:0000313|EMBL:ADU38235.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 300.0
  • Bit_score: 554
  • Evalue 9.60e-155

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGCTGCCCGTCGACGAGATACGCCTGCACTTCAACCCGGCCTCGCTGGTGCTGCTGAACGTGGTGCTGGGCTTCCTGATGTTCGGCATCGCGCTGGATACCCGCATCGAGGACTTCAAGCGCGTGGCGCGCATGCCCGGCGCGATGGCGGTGGGCATCGGCGCGCAGTTTGTGGTGCTGCCGGCGGTGACCTTCGCGCTCACGCTGATCCTGAAGCCGGGGCCGAGCATCGCGCTGGGCATGATCCTCGTGGCCTGCTGCCCGCCGGGAAACATCTCGCAGATCCTGACGCACCGCGCGCGCGGCAACGTGGCGCTGTCGGTGTCGATGACGGCCATTTCCAACGCCATCTCCATCGTGGTGATGCCGCTGAACTTCGCGTTCTGGGGCGGCCTGCACCCGAGCGCCGCGCCGCTGCTGAAGACCATCGCGCTCGATCCGCTCGACATGCTGGGCCACATCGTGATGATCATCGGCATTCCGTTCGTGCTGGGCGTGGCCTGCTCGCACAGGCTGCCGGCGCTCACGGCGCGCATCAAGAAGCCGGTGGGCGCGGTGAGCTTCATCGCGCTGATCGTGTTCATCGTGGGTGCCATCGCGGGCAACTGGCGCTTCTTCCTCGACTACGTGGGGCTGGTGCTGCTGGCCGTGGTGATTCATGACGCGCTGGCCTTCGGCACGGGCTACCTGTGCGCGCGGCTCTCGGGGCTGGGCGACTACGACCGGCGCGCGGTTGCCATCGAGGTGGGCATCCGCAACTCGGGGCTCGGGCTGGTGCTGATCTTCAGCTTCTTCGGCGGGCTCGGCGGCATGGCCGTGGTGGCGGGCGTGTGGGGCTTCTGGGACATCATCGCGGGACTGGCGCTCGCGGGCTGGTGGGGGCGCAGGCCCGTGAAGCCATGA
PROTEIN sequence
Length: 301
MLPVDEIRLHFNPASLVLLNVVLGFLMFGIALDTRIEDFKRVARMPGAMAVGIGAQFVVLPAVTFALTLILKPGPSIALGMILVACCPPGNISQILTHRARGNVALSVSMTAISNAISIVVMPLNFAFWGGLHPSAAPLLKTIALDPLDMLGHIVMIIGIPFVLGVACSHRLPALTARIKKPVGAVSFIALIVFIVGAIAGNWRFFLDYVGLVLLAVVIHDALAFGTGYLCARLSGLGDYDRRAVAIEVGIRNSGLGLVLIFSFFGGLGGMAVVAGVWGFWDIIAGLALAGWWGRRPVKP*