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SCNpilot_cont_300_bf_scaffold_83_curated_146

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(154226..155050)

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00037994A6 similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 280.0
  • Bit_score: 475
  • Evalue 2.80e-131
Variovorax paradoxus strain MEDvA23 contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36808.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 271.0
  • Bit_score: 456
  • Evalue 3.30e-125
short-chain dehydrogenase/reductase sdr similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 273.0
  • Bit_score: 454
  • Evalue 2.80e-125

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGCCCTTGCCTCTGCCGTATCGCAACGTCGTCCTCACCGGAGCCTGTGGTGGCCTGGGCCAGGCGCTTGCGCGCGAACTGCTCGGCGCGGGCGCCAAGGTGGCGCTGGTGGGGCTCGATGCAGGCAGGCTCGCCGAGCTGGTCGCGCTCGCGCCGGCGCAGGGTACGGCATACACGCCCGATGTTTCTTCCGGCCCGGCGATGCAGGCCATGGCGGCCGACTGGATGGCGCGAGCCGGCGTGCCCGACCTCGTGATCGCCAACGCGGGCGTCGCGGGCGGCTACGACACCGCCGAAGCAGACGACCTCGCGGTGTTCCGCCGCATGCTCGAGATCAACCTGCTGGGCGCGGCCACCACCTTCCAGCCTTTTCTGGCGGCGATGCGCGCGCAGCGGCGCGGCGCGCTCCTCGGCATGGCCAGCATCGCGGGCTGGCGTGGCATGCCCGGCAACGGCGCGTATTGCGCGAGCAAGGCGGGCCTGATCCGCTATCTGGAGAGCCTGCGCGCCGAACTGCGCGAGACCGGACTCACGGTGCACACCGTGAGCCCCGGCTATATCCGCACCGCGCTCACGGCCGGCAACCGCTTCGCGATGCCGGGGCTGCTCGAGGCCGACGAGGCCGCGCGCCGGCTCTTGGCCGCGGTGAGCGCGGGCCGCGAGAAGATCGTGCTGCCGCGCCGCATCGGGTGGCTCTCCAGGGCGCTCGACCTGCTGCCCGAAAAAATGCACGACCGCCTGCTGCGCGGCCAGCCGCGCAAGCCGCGTGTGGGCGAGGCGGGCGCCACGGCCATTCCTGGTCTTTCGAAGGAACCTCCCGCCTGA
PROTEIN sequence
Length: 275
MPLPLPYRNVVLTGACGGLGQALARELLGAGAKVALVGLDAGRLAELVALAPAQGTAYTPDVSSGPAMQAMAADWMARAGVPDLVIANAGVAGGYDTAEADDLAVFRRMLEINLLGAATTFQPFLAAMRAQRRGALLGMASIAGWRGMPGNGAYCASKAGLIRYLESLRAELRETGLTVHTVSPGYIRTALTAGNRFAMPGLLEADEAARRLLAAVSAGREKIVLPRRIGWLSRALDLLPEKMHDRLLRGQPRKPRVGEAGATAIPGLSKEPPA*