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SCNpilot_cont_300_bf_scaffold_83_curated_150

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(158218..159102)

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI000367EF30 similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 294.0
  • Bit_score: 557
  • Evalue 6.10e-156
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 289.0
  • Bit_score: 530
  • Evalue 2.50e-148
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:ADU38241.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 289.0
  • Bit_score: 530
  • Evalue 1.10e-147

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGGCGCCCAGGGAGAAAAGAAGGAAGACGACGCGGCTGCCGCTCGTCTTCATCGGGCCCGGGCTGCTGGTGCTGGCGGTGCTGGCACTGGTACCCACGCTCTTCGCCATCGGCATCTCGCTGCAGGACCGTGAACTGGGGCAGGCGGATACGGGCTGGGTCTGGTTCTCGAACTACATCCAGCTGTTCTCGGACCGGCGCTTTCTGAACTCCGTGCGCGTGTCGTTGGTGTGGGAAGTGCTGACCGTCAGCGCCACCATGGGCCTCGCGGTGCTGCTGGGCGTATTGCTGCACCAGTGCACCACGCCGCGCTGGCGCAACGTGCTGTCGATGCTGTTCATCGTGCCGGTGCTGCTGCCGCGCGTGTCGGCGGCCTTCGTGTGGAAGTTCGCCTTCCATCCGCTGTTCGGCCTGCTGACGTATCCCTACAAGGCCATCACCGGCGAACCGCTGGACCTGCTGGCCAGCCCGCTCACGGCGCTGTTCACCGTGGCCTTCGTGGACGTGTGGCAGTGGGGGCTGTTCTTCGCCGTCATCGTGCTCAAGCTGCTCGAAACCTTGCCGCCGCAGCCCTTCGAGGCCGCGCGCATGGACCACGCCAGGACCTGGGAGGTCTACGCCTACGTGGCGCTGCCGATGCTGAAGGCGCCGCTCGTGAGCCTGACTTTCGTGAAGATGGTCGAGTCGCTGCGCGCCTTCGACCTGATCTACGTGATGACGCGCGGCGGGCCCGGCATCTCGACCGAGACGCTGGACATGTACGCCTTCTCGCAAGGCTTCATCGAGTCGGGCCGTATCTCATATGCCTCGGGCATGGCGGTGCTGATGATGGTCGCCTCGACCGTCGCGTTCACCTACATCTGGAAATGGACGCGGCCGAAATGA
PROTEIN sequence
Length: 295
MAPREKRRKTTRLPLVFIGPGLLVLAVLALVPTLFAIGISLQDRELGQADTGWVWFSNYIQLFSDRRFLNSVRVSLVWEVLTVSATMGLAVLLGVLLHQCTTPRWRNVLSMLFIVPVLLPRVSAAFVWKFAFHPLFGLLTYPYKAITGEPLDLLASPLTALFTVAFVDVWQWGLFFAVIVLKLLETLPPQPFEAARMDHARTWEVYAYVALPMLKAPLVSLTFVKMVESLRAFDLIYVMTRGGPGISTETLDMYAFSQGFIESGRISYASGMAVLMMVASTVAFTYIWKWTRPK*