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SCNpilot_cont_300_bf_scaffold_83_curated_180

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(195151..195756)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B7286 similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 197.0
  • Bit_score: 219
  • Evalue 2.70e-54
HTH-type transcriptional regulator TtgR {ECO:0000313|EMBL:CEJ15515.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 197.0
  • Bit_score: 238
  • Evalue 6.00e-60
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 197.0
  • Bit_score: 199
  • Evalue 9.10e-49

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 606
ATGCGCAAAGTCGACCCTGAACGCCAGCAGGCCAAGCGCCGCCAGATCATGGAGGCCGCCGCCGATTGCTTCGCGCGACGCGGCTTCCATGCCACCACCACCGCCGAGATCTGTGCCGCCGCGGGCATGAGCCCGGGCAACCTCTTTCACTATTTCGACAGCAAGAGCGCCATCGTCGAAGCCATCATCGAAGAAGAGCAGCGCGACACCGCCGCCTACTTCGAGACGCTCGGCGACGCGCCCGACCTGCTGGAGGCGCTGCTGGGCTTTCTCGACGTGGTGATGGGCTTCGCGGCCGACAAGGCCTATTCGCGCCTGGCGCTCGAAATTGCGGCGGAGGCCACGCGCAACCCGACCGTGGGCGCGCGCGTGGCCGCGAGCGACGCCGCCACGCGCGAAGCCATCGCCGCGCTGCTGCGCACGGCCGTAGCGCGGAGGCAGGTGGACGCGAGCCTCGATGCCGGCCAGACGGCAAGCTGGATCGCCGCGCTGATCGACGGGGTCTTCGCGCGCCTGGCCGTCGACTCGAGCTTCGAGCCGGAGGCCGAGGCGCCGATGCTGCGGCTGATCGTCAGCCGCTTCCTGCGTCCCGGGAGGGCGGCATGA
PROTEIN sequence
Length: 202
MRKVDPERQQAKRRQIMEAAADCFARRGFHATTTAEICAAAGMSPGNLFHYFDSKSAIVEAIIEEEQRDTAAYFETLGDAPDLLEALLGFLDVVMGFAADKAYSRLALEIAAEATRNPTVGARVAASDAATREAIAALLRTAVARRQVDASLDAGQTASWIAALIDGVFARLAVDSSFEPEAEAPMLRLIVSRFLRPGRAA*