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SCNpilot_cont_300_bf_scaffold_399_curated_4

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(1614..3350)

Top 3 Functional Annotations

Value Algorithm Source
actetate permease n=1 Tax=Variovorax paradoxus RepID=UPI00037F8330 similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 578.0
  • Bit_score: 1081
  • Evalue 0.0
Acetate transporter ActP {ECO:0000313|EMBL:EWS65932.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 567.0
  • Bit_score: 974
  • Evalue 7.50e-281
actP; cation/acetate symporter ActP; K14393 cation/acetate symporter similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 578.0
  • Bit_score: 969
  • Evalue 5.40e-280

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Taxonomy

Hydrogenophaga sp. T4 → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1737
ATGAGCCTGCGTTCCTCGACCATCCTGCGCGCGCGATCCGCGGCGGTCTTCTGCGCACTGTCGGCCCTCGGCGCGGCGGCTCTCGCGGCCGGTGCCGACCTCGGCCAGCTGCAGAAGCAGGCCACCAACTGGACCGCCATCGGCATGTTCGGCCTCTTCGTGGTGGCGACCCTCTTCATCACCAAGTGGGCCGCGGCGCGCACCCGCTCGGCGTCCGACTTCTACACGGCCGGCGGCGGCATCACGGGTTTCCAGAACGGGCTCGCCATCGCCGGCGACTACATGTCGGCGGCGTCGTTCCTGGGCATCTCGGCCGCGGTCATGGCCTCCGGCTACGACGGGCTGATCTACTCCATCGGCTTCCTCGTGGGGTGGCCGGTCATCACCTTCCTGATGGCGGAGCGGCTGCGCAACCTCGGCAAGTTCACCTTCGCCGACGTCGCGGCCTTCCGCTTCAGGCAGACGCCGGTGCGCATCTTCGCGGCCTCCGGCACGCTGGTGGTGGTGGCCTTCTATCTCATCGCGCAGATGGTGGGCGCGGGGCAGCTGATCAAGCTGCTGTTCGGTCTCGAGTACTGGGTCGCGGTGGTCATCGTCGGCTCGCTCATGATGGTGTACGTGCTCTTCGGCGGCATGACGGCCACGACCTGGGTGCAGATCATCAAGGCCGGCCTGCTGCTGGGCGGCGCGAGCTTCATGGCGATCTCGGTGCTCTGGCACTTCGGCTTCAGCCCCGAGGCGATGTTCGCGGGCGCGGTCAAGGTCAAGACCGACCTGGCGCTGAAGGACGGCAAGACGGCCGAGGTGGCCGCGGGCATCGGCCAGTCGATCATGGGGCCGGGCAATTTCGTGAAGGACCCGATCTCCGCCATCTCCTTCGGCATGGCGCTCATGTTCGGCACGGCCGGGCTGCCGCACATCCTGATGCGCTTCTTCACCGTGCCCAGCGCCAAGGAGGCGCGCAAATCGGTCATGTGGGCGACCGGATGGATCGGCTACTTCTACCTGCTGACCTTCATCATCGGCTTCGGCGCCATCACCTTCGTGCTGACGAATCCGGACTTCCTCGACGCCAAGGGCCTGCTCAAGGGCGGCGGCAACATGGCGGCGATCCACCTGGCGAACGCCGTGGGCGGCAACGTGTTCCTCGGCTTCATCTCGGCGGTGGCCTTCGCGACCATCCTGGCCGTGGTGGCGGGCCTCACGCTCTCCGGCGCTTCGGCCGTCTCTCACGACCTGTACGCCACCGTCATCCGGAAGGGCGACGCGGGCAGCGCGGCCGAGCTGCGCGTGTCCAGGATCACCACGCTGGCGCTCGGCGCGCTGGCGGTGCTGCTGGGCATCGTGTTCGAGAAGCAGAACATCGCCTTCATGGTGTCGCTGGCCTTCGCCATCGCGGCCTCGGCCAACTTCCCGGTGCTCTTCATGTCGGTGCTCTGGAAGGGCTGCACCACGCGCGGGGCTGTGATCGGCGGCTTCCTCGGGCTGATTTCCTCGGTGGTGCTCACGGTGGTCTCGCCCTCAGTCTGGGAGGCCACGCTCGGCCATCCGGCCGGCTCCTCGCTGTTTCCCTACACCTCGCCGTGCCTGTTCTCGATGAGCATCGCCTTCGTGGGCATCTGGCTGTTCTCGGTGCTCGACCGCAGCGCGCGTGCGCAGGTCGACCGGGGCGGCTTCCTGGCACAGCAGGTGCGTTCGGAAACCGGTATCGGCGCGCACGGCCCGATCGGGCACTGA
PROTEIN sequence
Length: 579
MSLRSSTILRARSAAVFCALSALGAAALAAGADLGQLQKQATNWTAIGMFGLFVVATLFITKWAAARTRSASDFYTAGGGITGFQNGLAIAGDYMSAASFLGISAAVMASGYDGLIYSIGFLVGWPVITFLMAERLRNLGKFTFADVAAFRFRQTPVRIFAASGTLVVVAFYLIAQMVGAGQLIKLLFGLEYWVAVVIVGSLMMVYVLFGGMTATTWVQIIKAGLLLGGASFMAISVLWHFGFSPEAMFAGAVKVKTDLALKDGKTAEVAAGIGQSIMGPGNFVKDPISAISFGMALMFGTAGLPHILMRFFTVPSAKEARKSVMWATGWIGYFYLLTFIIGFGAITFVLTNPDFLDAKGLLKGGGNMAAIHLANAVGGNVFLGFISAVAFATILAVVAGLTLSGASAVSHDLYATVIRKGDAGSAAELRVSRITTLALGALAVLLGIVFEKQNIAFMVSLAFAIAASANFPVLFMSVLWKGCTTRGAVIGGFLGLISSVVLTVVSPSVWEATLGHPAGSSLFPYTSPCLFSMSIAFVGIWLFSVLDRSARAQVDRGGFLAQQVRSETGIGAHGPIGH*