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SCNpilot_cont_300_bf_scaffold_116_curated_292

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 372260..373573

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003634924 similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 437.0
  • Bit_score: 800
  • Evalue 6.10e-229
Variovorax paradoxus strain MEDvA23 contig_49, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28214.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 432.0
  • Bit_score: 798
  • Evalue 4.30e-228
hypothetical protein; K03699 putative hemolysin similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 435.0
  • Bit_score: 789
  • Evalue 7.60e-226

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
ATGGATGTCTTCCTGCTGGCCTTGCTGACGACGCTCAACGCGGCGTTCGCAATGTCCGAAATGGCCCTTTCCACCAGCCGCCGCGCACGTCTCGCGGCCTTGGCCGAAACGGGAGACGCCGGCGCCGAGGCGGCGCTCAAGCTGATGGAGTCGCCGACGCAGTTCCTGTCCACGGTGCAGATCGGCATCACCTCCATCGGCATGCTGAGCGGCATCGTCGGCGAGGCCGCCTTCGCGGCGCCGCTGGCGGTGTGGATGGAATCGGTCGGCATGGGCGCCGGCACCGCCAGCGTGGTGTCGACCGCGGCGGTGGTCACCTGCATCACCTTCTTCACCATCATCTTCGGCGAGCTGGTGCCCAAGCGCATCGGCCAGCTCTACCCCGAGCCGGTGGCGCGTTTCGTGGCGCGCCCCATGCGCGGGCTGGCCAAGGCGGCCAAGCCCTTCGTGTGGTTGCTGGCCGGCGCCACCGCCGCCACGCTGAAGCTGCTGCGCATCGACGCCAACGCGGCCCGTTCGGTCACCGAAGAGGAAATCTCGGCCAGCCTCGAAGAAGGCGTGGACGCCGGCGTCATCGAGCAGCACGAGCACCAGATGGTGCGCAATGTGTTTCACCTCGATGACAGACGCCTGTCGTCGCTCATGATCCCGCGCGCCGACATCGAATGGCTCGACGCCTCGTTCACCGTGCGGCAGGCGCTGCAGAAGGTGGCCGACGCGGCTGCGCTCAACCTCGTGCACTCCTGGTATCCGGTGTGCCGCAACTCGCTCGACGACGTGGTCGGCGTGATCAGCGTGGCGCACCTGCTGCGCCTGGGCGCCGCGCACACCGGCGTGCTGGGCCAGGAAGCCACGCCCGCGGTGTTCGTACCCGAGACCCTCACCGGCATGGAGCTGCTCGAGCAGTTCCGCGCCCGCGCCGGCCGCCTGGTGTTCGTGGTCGACGAATATGGCGTGGTGCAAGGCCTCATGACCCCGCGCGACCTGCTCGAAGCCATTGCCGGCGAGCTTCAGCCCGGCATGCAGACCGACGCCTGGGCGCGCGAGCGGCCCGACGGCGTGTGGGAACTCGATGGCCTCATGCCGGTGTCAGAGCTGCGCGCGCGCCTGGGCATCCGCGAGCTGCCCGATGAGGAGCGCGGCCGCTATAACACCGTGGCGGGCCTGCTCATGGCCGTGTCCGGCCACCTGCCGGAGGTCGGCGAGCACATCGATTGCGCCGGCTGGTGCTTCGAGATCGTGGCGCTCGAGGGCCGCCGCATCGACCGCGTGCTGGCATCGCCCGATCCGGCGGCCGCTCCAGAGACCGACTAG
PROTEIN sequence
Length: 438
MDVFLLALLTTLNAAFAMSEMALSTSRRARLAALAETGDAGAEAALKLMESPTQFLSTVQIGITSIGMLSGIVGEAAFAAPLAVWMESVGMGAGTASVVSTAAVVTCITFFTIIFGELVPKRIGQLYPEPVARFVARPMRGLAKAAKPFVWLLAGATAATLKLLRIDANAARSVTEEEISASLEEGVDAGVIEQHEHQMVRNVFHLDDRRLSSLMIPRADIEWLDASFTVRQALQKVADAAALNLVHSWYPVCRNSLDDVVGVISVAHLLRLGAAHTGVLGQEATPAVFVPETLTGMELLEQFRARAGRLVFVVDEYGVVQGLMTPRDLLEAIAGELQPGMQTDAWARERPDGVWELDGLMPVSELRARLGIRELPDEERGRYNTVAGLLMAVSGHLPEVGEHIDCAGWCFEIVALEGRRIDRVLASPDPAAAPETD*