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SCNpilot_cont_300_bf_scaffold_189_curated_31

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 41740..42066

Top 3 Functional Annotations

Value Algorithm Source
membrane protein TolA n=1 Tax=Variovorax paradoxus RepID=UPI000377FDD0 similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 108.0
  • Bit_score: 98
  • Evalue 4.90e-18
Uncharacterized protein {ECO:0000313|EMBL:EJL67929.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 108.0
  • Bit_score: 97
  • Evalue 1.50e-17
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 108.0
  • Bit_score: 92
  • Evalue 6.40e-17

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGACGAAATCCTTGTCCGTCCTTTCCGTGCTGATGGCCGGCTTGATCGCGAGCGTGGCTCATGCCCAATCGAATCCGCCCGGAGCGGCCGTGCCGCCCAACACGCCGGGCTATGCCACCGGCAAGTCTGAAATGGCGGGCGAAGCGCGCAAGGACCGCCGTCCGCAGAAGGGCGTTCCAGCCGCGGCGGGTGACGAAGCCAAGACGCCCGAAGGTGGCGCCATCGGGAACGACCGCGCCGCTGCGGCAGGCGAACGACGCGCCGAGACCCGCGACGCGCGCCGCCCCGGCAAGCCGAAGCCGGTGCCCGGCGGAACGCCCAAGTAA
PROTEIN sequence
Length: 109
MTKSLSVLSVLMAGLIASVAHAQSNPPGAAVPPNTPGYATGKSEMAGEARKDRRPQKGVPAAAGDEAKTPEGGAIGNDRAAAAGERRAETRDARRPGKPKPVPGGTPK*