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SCNpilot_cont_300_bf_scaffold_118_curated_131

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 111655..112173

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J3CNB7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 172.0
  • Bit_score: 268
  • Evalue 5.60e-69
Putative membrane protein {ECO:0000313|EMBL:EJL75169.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 172.0
  • Bit_score: 268
  • Evalue 7.90e-69
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 168.0
  • Bit_score: 169
  • Evalue 1.10e-39

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGGAAGACCAGTCGCAGGACGCGCGCTATGCGCCGCCGCAATCCCATGTGGAAGACGTGCAGCAGACCGGCCAGCCGCAGCCGGGCGAGCTCGCGACGCGCGGCAGGCGCTTCCTGGCGGCCATGCTCGACGGCGGCATCGCAATCGGCGTGCTGTGGCTGCTGTCGATGTTCACGCCCTACGACGTCTGGAGCGACGACGGCCGCAGCCTCTGGACGCCGCGCCTCGCCGACACCGCCGTCGGCATCCTGGTCTACCTCGTGCTGCACGGCTATCTGCTGGCCACGCGCGGCCAGACCATCGGCAAGGCGCTGCTCAAGATCCGCATCGCTCGGCCCGACGGCTCCAAGCCGTCCATCGGCCGCATCCTCGGCCTGCGCGAGAGCCTGCTGTTCCTGCTGAACATCGTGCCGATGATCGGGCAGGTCTTCGTGCTGGTCGACAGCCTGTTCATCTTCCGTGCGTCACGCCGCTGCCTGCACGACCAGATCGCCGATACGGTCGTGCTGCAGGCCTGA
PROTEIN sequence
Length: 173
MEDQSQDARYAPPQSHVEDVQQTGQPQPGELATRGRRFLAAMLDGGIAIGVLWLLSMFTPYDVWSDDGRSLWTPRLADTAVGILVYLVLHGYLLATRGQTIGKALLKIRIARPDGSKPSIGRILGLRESLLFLLNIVPMIGQVFVLVDSLFIFRASRRCLHDQIADTVVLQA*