ggKbase home page

SCNpilot_cont_300_bf_scaffold_174_curated_6

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 5049..6083

Top 3 Functional Annotations

Value Algorithm Source
peptide ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00037CF4DB similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 347.0
  • Bit_score: 615
  • Evalue 2.90e-173
oligopeptide/dipeptide ABC transporter ATPase; K12372 dipeptide transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 340.0
  • Bit_score: 614
  • Evalue 2.60e-173
DppF protein {ECO:0000313|EMBL:KIQ25637.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 340.0
  • Bit_score: 614
  • Evalue 6.90e-173

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGAGCGAGGCATCGACCGGTGTGGTCGTCGAGGCGACCAACCTGCAACGCACCTACGACATCCGCCGCGGGCTGTTCCGTGCGCCGTCGCATCTGCGCGCGGTGGGCGACATCTCGTTTCGCATCGAACGCGGCCGCACGCTGGCCGTGGTCGGCGAGTCGGGCTGCGGCAAGTCGACGCTGGCGCGCATGGTCGCGCTGATCGAGAAGCCGACGGCGGGCCAGCTCACGCTGGTCGGCACCGATGCCGTCGATACGCCGGCCGAGCGCAAGCGCGAGCTGCGCCAGGCCGTGCAGTTGGTGTTCCAGAACCCGTACGGCTCGCTCAATCCGCGCAAGAAGATCTCGGCGGTGCTCGAAGATCCGCTGGCCATCAACACCACCATGGGCAAGCAGGAGCGCGCCGCCAAAGCCCGCGAGATGCTGGCACGCGTGGGCCTGCGGCCCGAGTACGCCAACCGCTATCCGCACATGTTTTCCGGCGGCCAGCGCCAGCGCATCGCCATTGCGCGCGCGCTGATGCTGAACCCGCGTTTGCTGGTGGCCGACGAGCCGGTGTCGGCGCTCGATGTGTCGATCCAGGCGCAGGTGCTGAACCTGCTGGCCGACCTGCAGGCCGAATTGGGGCTGGCGTATCTCTTCATCTCGCACGACCTTGGCGTGGTGCGACACATCGCGCACGACGTGCTCGTGATGTACCTCGGCCATGCGGTGGAGCAGGGCCCGAAGTCGCGCATCTTCTCGCGACCGCTGCATCCCTACACGCAGGCGCTGCTGGCCTCGACGCCGGGGCTCAGCAGCCAGCGCATCGTGCTCAAGGGCGAGCTGCCGTCGCCGCTGAACCCTCCCGCCGGTTGCGTGTTCAGCACGCGCTGCCCGCACGTGGCCGAGCGCTGCCGCCAGGAGCGCCCGCTGCCGCGCATGCTCGACGAGCGGCTGGTGGCCTGCCACTACTCGGAGAAGTTTCTCGACGGCGCGCCGCTCGTGCGCGCCGATGTTCCGTCGGCCGCCATCGCGATGGCGACGAATCTCTAG
PROTEIN sequence
Length: 345
MSEASTGVVVEATNLQRTYDIRRGLFRAPSHLRAVGDISFRIERGRTLAVVGESGCGKSTLARMVALIEKPTAGQLTLVGTDAVDTPAERKRELRQAVQLVFQNPYGSLNPRKKISAVLEDPLAINTTMGKQERAAKAREMLARVGLRPEYANRYPHMFSGGQRQRIAIARALMLNPRLLVADEPVSALDVSIQAQVLNLLADLQAELGLAYLFISHDLGVVRHIAHDVLVMYLGHAVEQGPKSRIFSRPLHPYTQALLASTPGLSSQRIVLKGELPSPLNPPAGCVFSTRCPHVAERCRQERPLPRMLDERLVACHYSEKFLDGAPLVRADVPSAAIAMATNL*