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SCNpilot_cont_300_bf_scaffold_174_curated_81

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 90335..91522

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS_1 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5C6_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 395.0
  • Bit_score: 723
  • Evalue 1.10e-205
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 395.0
  • Bit_score: 723
  • Evalue 3.50e-206
Variovorax paradoxus strain MEDvA23 contig_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36691.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 390.0
  • Bit_score: 723
  • Evalue 1.60e-205

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGGTCCTGGCGCTGTGCGCCGGGGTCGCGCTGAGCCAGGCGTTCCGCACGGTCGGCGCCATCATGGCGAGTCCGCTGCAGGCCGACTTCAGGCTGTCGGCCCAGGCCCTCGGGATTTTCTCGGGGGCTTTTCATTTTGCGTTCGGTGCGATGCAGCTGTTCATGGGCATCGGCATCGACCTGCACGGCGTGCGGCGCACGGTGCTGGTGGCGTTCCCCATCGCCATCGCGGGCGCGCTGTTGTCGGCGGTAGCGCCCAACTACCTCGTGCTGGTGGCGGGGCAGGCGCTGATCGGCGTCGGCTGCGCGCCGGCCTTCCTGGTGTGCACCGTGTTCATCGCGCGGCACTTTCCGGCGGCGCGCTTCGCCACCGTGTCGGGCATGGTGCTGGCCATCGGCGGGCTGGGCATGCTGGCCACCGGCACGCCGCTGGCGTGGCTGGTGCAGGCCTATTCATGGCGCGCGGGCTTCCTGGTGCTGGCCGTGGCGGCCGCGCTGGCCTGGCTCGCCATCTGGTATTGGGTGCACGAGCCCGCTGCGGCCGTGCCGCAGGTGAAGGAATCGATCCCCGAGGCCATCCGCCAGTTCGGCGCGCTGTTCGCGATGCCGCACACGCTCGGCATCGTGGTGCTGGGCGCGGTTACTTATGCGGCCTTCATCTCGCTGCGCGGCCTGTGGCTGGGCCCGCTCATGATGGGGCGGCACGGCTATTCGCTGGTGGAAAGCGGCAACGTCGCGGTGGCGGTGTCGGTGATCTCGCTGTTCGGCGCGCCGCTGTTCGGCCGGCTCGACCGCGACGGTGCGGGCCGCCGCCGCTGGATCGTGATCTGCGGGCTCGGCTATGCGGGGCTCTTCGCGCTCATCGCGGTGCTGCACTCGGCCTGGCTCGACATCGCGGGCATGGTGCTGATCGGCGTGCTCTCGGGTTTCATCGTCTGGCAGTACGCCGACGTGCGCGGCGCCTACCCCGCCACGCTCACTGGCCGTGCGATGGCCGTGTTCACGATGGCGATGTTCCTCGGCGTCGCGCTCATGCAGTGGGGCACCGGGGTCGCCGCATCGGTGGCGTCGGCGCACGGCGGCGACCCGCTGACGGCCGTGCTGGCGACCATCGCCGTGCTGCTGGTGATCGGCATCGCGGCCTTCGCGTGGCTGCCCGCGCCGAAGGCCGGCGAAATCAGATCTTGA
PROTEIN sequence
Length: 396
MVLALCAGVALSQAFRTVGAIMASPLQADFRLSAQALGIFSGAFHFAFGAMQLFMGIGIDLHGVRRTVLVAFPIAIAGALLSAVAPNYLVLVAGQALIGVGCAPAFLVCTVFIARHFPAARFATVSGMVLAIGGLGMLATGTPLAWLVQAYSWRAGFLVLAVAAALAWLAIWYWVHEPAAAVPQVKESIPEAIRQFGALFAMPHTLGIVVLGAVTYAAFISLRGLWLGPLMMGRHGYSLVESGNVAVAVSVISLFGAPLFGRLDRDGAGRRRWIVICGLGYAGLFALIAVLHSAWLDIAGMVLIGVLSGFIVWQYADVRGAYPATLTGRAMAVFTMAMFLGVALMQWGTGVAASVASAHGGDPLTAVLATIAVLLVIGIAAFAWLPAPKAGEIRS*