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SCNpilot_cont_500_bf_scaffold_3850

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3850_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..189)
DNA (189bp) protein (63aa)
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
Pyruvate kinase n=2 Tax=Comamonas testosteroni RepID=D0IX60_COMT2
SCNpilot_cont_500_bf_scaffold_3850_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

661..1932
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XXM1_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD44289.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3850_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1972..2742)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WRI5_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD35307.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
abortive infection protein rbh
SCNpilot_cont_500_bf_scaffold_3850_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2783..3772)
DNA (990bp) protein (330aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
proline aminopeptidase P II n=1 Tax=Chryseobacterium taeanense RepID=UPI000371FFE1
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:EPD44291.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
SCNpilot_cont_500_bf_scaffold_3850_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3783..4124)
DNA (342bp) protein (114aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
Peptidase M24 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQG1_DELAS
Uncharacterized protein {ECO:0000313|EMBL:KFJ11692.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_500_bf_scaffold_3850_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4226..4756)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XGG7_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD44292.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
rhodanese domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_3850_7
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4782..5099)
DNA (318bp) protein (106aa)
transcriptional regulator n=1 Tax=Chryseobacterium taeanense RepID=UPI000319504C
Transcriptional regulator {ECO:0000313|EMBL:KEH07931.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
transcriptional regulator TrmB
SCNpilot_cont_500_bf_scaffold_3850_8
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5181..6026
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XXM6_DELAC rbh
Beta-lactamase {ECO:0000313|EMBL:KEH12229.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
beta-lactamase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_3850_9
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6084..6530
DNA (447bp) protein (149aa)
OsmC family protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ALS0_DELSC
OsmC family protein; K07397 putative redox protein
OsmC family protein {ECO:0000313|EMBL:AEF92575.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_cont_500_bf_scaffold_3850_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6491..6787)
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W6N0_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35313.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3850_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6979..8376
DNA (1398bp) protein (466aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=S2XGH2_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD44297.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
Pirin domain-containing protein; K06911 rbh
SCNpilot_cont_500_bf_scaffold_3850_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8577..9308
DNA (732bp) protein (244aa)
Peptidase C26 n=4 Tax=Delftia RepID=A9BQF3_DELAS
peptidase C26; K07010 putative glutamine amidotransferase
Peptidase C26 family protein {ECO:0000313|EMBL:KFJ10008.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_500_bf_scaffold_3850_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9293..10312)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WRJ2_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD35317.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_3850_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10389..10730
DNA (342bp) protein (114aa)
extradiol ring-cleavage dioxygenase LigAB LigA subunit; K04100 protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
Extradiol ring-cleavage dioxygenase LigAB LigA subunit n=2 Tax=Delftia RepID=A9BQF1_DELAS
Aromatic-ring-opening dioxygenase LigAB, LigA subunit {ECO:0000313|EMBL:KFJ09524.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_500_bf_scaffold_3850_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10778..11623
DNA (846bp) protein (282aa)
protocatechuate 4,5-dioxygenase (EC:1.13.11.8); K04101 protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] rbh
Protocatechuate 4,5-dioxygenase, beta chain n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X5X9_DELAC rbh
Protocatechuate 4,5-dioxygenase, beta chain {ECO:0000313|EMBL:EPD35319.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_3850_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11708..12232)
DNA (525bp) protein (175aa)
FKBP-type peptidylprolyl isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] rbh
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WAX1_DELAC rbh
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD {ECO:0000313|EMBL:EPD35320.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_500_bf_scaffold_3850_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12290..13183)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XXN6_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD44304.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_3850_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13284..14309
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X291_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD44305.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3850_19
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14326..15702
DNA (1377bp) protein (459aa)
3-carboxy-cis,cis-muconate cycloisomerase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W6N7_DELAC rbh
Fumarate lyase {ECO:0000313|EMBL:KEH12222.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
fumarate lyase rbh
SCNpilot_cont_500_bf_scaffold_3850_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15719..16171
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XGI2_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD44307.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
carboxymuconolactone decarboxylase
SCNpilot_cont_500_bf_scaffold_3850_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16188..17231)
DNA (1044bp) protein (348aa)
Pirin domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQE4_DELAS rbh
pirin domain-containing protein; K06911 rbh
Pirin domain protein {ECO:0000313|EMBL:ABX33554.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_500_bf_scaffold_3850_22
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17401..18123)
DNA (723bp) protein (241aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18] rbh
Glutathione S-transferase domain protein n=2 Tax=Delftia RepID=F6ALT4_DELSC rbh
Glutathione S-transferase {ECO:0000313|EMBL:KEH12219.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCNpilot_cont_500_bf_scaffold_3850_23
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18360..18473)
DNA (114bp) protein (38aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003818460
Uncharacterized protein {ECO:0000313|EMBL:KEH12218.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
Displaying 23 items

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