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SCNpilot_cont_500_bf_UNK

In projects: SCNPILOT_CONT_500_BF
Displaying items 36651-36700 of 37192 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_59334
Species: Nematostella vectensis (100%)
1 1691 bp 34.71 6.51 33.00
SCNpilot_cont_500_bf_scaffold_59846
Species: R_Betaproteobacteria_67_26 (100%)
1 1124 bp 66.64 4.45 90.21
SCNpilot_cont_500_bf_scaffold_66382
Species: Hyphomicrobium denitrificans (100%)
1 1016 bp 65.65 11.07 88.58
SCNpilot_cont_500_bf_scaffold_34250
Species: Altererythrobacter atlanticus (100%)
1 1774 bp 59.75 4.51 76.10
SCNpilot_cont_500_bf_scaffold_37394
Species: RHI_Gammaproteobacteria_63_22 (100%)
1 1653 bp 68.42 11.04 100.00
SCNpilot_cont_500_bf_scaffold_37906
Species: Plasmodium falciparum (100%)
1 1633 bp 11.82 6.28 66.87
SCNpilot_cont_500_bf_scaffold_15442
Species: Acetobacteraceae bacterium AT-5844 (100%)
1 3239 bp 71.29 8.10 90.31
SCNpilot_cont_500_bf_scaffold_28490
Species: Azospirillum lipoferum (100%)
1 2046 bp 37.98 3.30 48.68
SCNpilot_cont_500_bf_scaffold_33002
Species: Lactobacillus oris (100%)
1 1825 bp 68.00 8.90 99.95
SCNpilot_cont_500_bf_scaffold_38378
Species: Nematostella vectensis (100%)
1 1616 bp 30.07 19.96 15.59
SCNpilot_cont_500_bf_scaffold_36706
Species: Candidatus Caedibacter acanthamoebae (100%)
1 3195 bp 31.39 2.66 39.44
SCNpilot_cont_500_bf_scaffold_60138
Species: Mesorhizobium sp. L2C084A000 (100%)
1 1119 bp 72.74 1.79 99.73
SCNpilot_cont_500_bf_scaffold_65086
Species: Sphingomonas taxi (100%)
1 1662 bp 66.85 32.64 99.82
SCNpilot_cont_500_bf_scaffold_65342
Species: Mesorhizobium sp. ORS3359 (100%)
1 1032 bp 62.98 2.91 50.00
SCNpilot_cont_500_bf_scaffold_55438
Species: Mucilaginibacter paludis (100%)
1 1202 bp 51.91 1.87 99.83
SCNpilot_cont_500_bf_scaffold_49510
Species: Altererythrobacter atlanticus (100%)
1 1316 bp 63.60 3.42 99.85
SCNpilot_cont_500_bf_scaffold_63534
Species: Leifsonia aquatica (100%)
1 1061 bp 70.41 4.01 99.81
SCNpilot_cont_500_bf_scaffold_51558 1 1274 bp 56.91 7.65 40.97
SCNpilot_cont_500_bf_scaffold_45862
Species: R_Rokubacteria_73_56 (100%)
1 1401 bp 70.88 3.39 99.79
SCNpilot_cont_500_bf_scaffold_52118
Species: Azorhizobium caulinodans (100%)
1 1263 bp 63.42 6.33 96.44
SCNpilot_cont_500_bf_scaffold_64142
Species: Mucor circinelloides (100%)
1 1051 bp 55.28 2.85 99.90
SCNpilot_cont_500_bf_scaffold_67215
Species: Microbacterium oleivorans (100%)
1 1003 bp 73.98 12.71 96.31
SCNpilot_cont_500_bf_scaffold_62751 1 1075 bp 19.35 4.88 47.16
SCNpilot_cont_500_bf_scaffold_61031
Species: Singulisphaera acidiphila (100%)
1 1104 bp 72.64 5.43 61.68
SCNpilot_cont_500_bf_scaffold_61287
Species: Haemophilus influenzae (100%)
1 1099 bp 63.88 2.96 99.64
SCNpilot_cont_500_bf_scaffold_61543
Species: RLO_Rhodospirillales_67_15 (100%)
1 1095 bp 72.69 11.42 99.73
SCNpilot_cont_500_bf_scaffold_61799 1 1091 bp 15.58 5.27 68.74
SCNpilot_cont_500_bf_scaffold_20107
Species: Hyphomicrobium denitrificans (100%)
1 2666 bp 59.75 13.32 69.99
SCNpilot_cont_500_bf_scaffold_59079
Species: R_Sphingopyxis_65_24 (100%)
1 1137 bp 64.64 26.61 99.74
SCNpilot_cont_500_bf_scaffold_59335
Species: RBG_13_Planctomycetes_63_9_curated (100%)
1 1133 bp 75.55 2.21 99.82
SCNpilot_cont_500_bf_scaffold_38379
Species: Nitrobacter hamburgensis (100%)
1 1616 bp 56.19 52.75 70.92
SCNpilot_cont_500_bf_scaffold_38635
Species: Burkholderia sp. CCGE1002 (100%)
1 1608 bp 64.68 4.35 91.60
SCNpilot_cont_500_bf_scaffold_32427
Species: Bradyrhizobium sp. DFCI-1 (100%)
1 1850 bp 66.00 3.38 99.89
SCNpilot_cont_500_bf_scaffold_39267 1 1588 bp 53.84 9.92 49.50
SCNpilot_cont_500_bf_scaffold_41131
Species: Caulobacter sp. K31 (100%)
1 1531 bp 66.69 3.59 90.14
SCNpilot_cont_500_bf_scaffold_41899 1 1507 bp 55.81 6.14 5.18
SCNpilot_cont_500_bf_scaffold_40667
Species: R_Alphaproteobacteria_66_14 (100%)
1 1545 bp 72.10 2.91 100.00
SCNpilot_cont_500_bf_scaffold_65855
Species: Escherichia coli (100%)
1 1463 bp 52.84 11.11 7.18
SCNpilot_cont_500_bf_scaffold_44391
Species: Sphingobium japonicum (100%)
1 1439 bp 60.46 1355.46 87.35
SCNpilot_cont_500_bf_scaffold_50743
Species: Cystobacter violaceus (100%)
1 1290 bp 31.47 15.89 21.86
SCNpilot_cont_500_bf_scaffold_51303
Species: Mesorhizobium amorphae (100%)
1 1279 bp 67.24 3.32 86.32
SCNpilot_cont_500_bf_scaffold_47071
Species: Desulfocapsa sulfexigens (100%)
1 1372 bp 38.19 2.92 88.56
SCNpilot_cont_500_bf_scaffold_45607 1 1407 bp 62.33 2.49 47.76
SCNpilot_cont_500_bf_scaffold_64911
Species: Mycoplasma conjunctivae (100%)
1 1039 bp 62.37 5.05 99.62
SCNpilot_cont_500_bf_scaffold_53704 1 1234 bp 58.59 8.10 60.29
SCNpilot_cont_500_bf_scaffold_67216
Species: Bradyrhizobium sp. ORS 285 (100%)
1 1003 bp 51.84 4.99 64.61
SCNpilot_cont_500_bf_scaffold_72370
Species: Devosia epidermidihirudinis (100%)
1 1612 bp 64.08 2.95 97.15
SCNpilot_cont_500_bf_scaffold_62240
Species: Microbacterium sp. MEJ108Y (100%)
1 1083 bp 67.59 13.39 99.72
SCNpilot_cont_500_bf_scaffold_62496 1 1079 bp 61.35 1.85 94.53
SCNpilot_cont_500_bf_scaffold_62752
Species: R_Betaproteobacteria_62_17 (100%)
1 1075 bp 71.91 2.79 99.91
Displaying items 36651-36700 of 37192 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.