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SCNpilot_cont_500_bf_UNK

In projects: SCNPILOT_CONT_500_BF

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 9.76 Longest contig: 386.69 Kbp Bin length: 82.77 Mbp GC content: 60.60 %
Contigs count: 37192 Features count: 111529 rRNAs count: 18 tRNAs count: 413

Genome completeness

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 16
Displaying items 36451-36500 of 37192 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_500_bf_scaffold_24238
Species: Leifsonia aquatica (66.67%)
3 3846 bp 74.08 3.90 100.55
SCNpilot_cont_500_bf_scaffold_97000
Species: Mesorhizobium plurifarium (66.67%)
3 1098 bp 64.66 7.74 100.55
SCNpilot_cont_500_bf_scaffold_61389
Species: Microbacterium sp. MRS-1 (50%)
2 1098 bp 73.22 4.10 100.55
SCNpilot_cont_500_bf_scaffold_43792
Phylum: Proteobacteria (66.67%)
3 1456 bp 66.76 2.92 100.55
SCNpilot_cont_500_bf_scaffold_49907
Genus: Rhodanobacter (66.67%)
3 1814 bp 70.78 18.61 100.55
SCNpilot_cont_500_bf_scaffold_51852
Order: Micrococcales (66.67%)
3 1268 bp 74.29 2.96 100.55
SCNpilot_cont_500_bf_scaffold_44110
Species: Sphingobium sp. SYK-6 (66.67%)
3 1447 bp 63.99 3.97 100.55
SCNpilot_cont_500_bf_scaffold_52139
Species: Nitrobacter hamburgensis (100%)
2 1262 bp 62.68 2.38 100.55
SCNpilot_cont_500_bf_scaffold_52162 2 1262 bp 61.09 2.38 100.55
SCNpilot_cont_500_bf_scaffold_52319
Species: Singulisphaera acidiphila (50%)
2 1259 bp 63.62 4.77 100.56
SCNpilot_cont_500_bf_scaffold_52320
Species: Leifsonia xyli (66.67%)
3 1259 bp 71.33 3.77 100.56
SCNpilot_cont_500_bf_scaffold_52323
Species: Candidatus Entotheonella sp. TSY1 (66.67%)
3 1259 bp 68.39 4.96 100.56
SCNpilot_cont_500_bf_scaffold_62638
Species: Delftia acidovorans (50%)
2 1077 bp 59.61 59.42 100.56
SCNpilot_cont_500_bf_scaffold_33133
Species: bacterium YEK0313 (50%)
2 2497 bp 65.80 4.81 100.56
SCNpilot_cont_500_bf_scaffold_18351
Species: Subdoligranulum variabile (50%)
2 2852 bp 70.41 3.59 100.56
SCNpilot_cont_500_bf_scaffold_53296
Species: Microbacterium mangrovi (100%)
2 1241 bp 74.46 12.29 100.56
SCNpilot_cont_500_bf_scaffold_50885
Species: Hyphomicrobium denitrificans (100%)
4 2118 bp 61.43 9.56 100.57
SCNpilot_cont_500_bf_scaffold_45461
Species: Pseudomonas sp. 21 (100%)
2 1411 bp 66.83 3.01 100.57
SCNpilot_cont_500_bf_scaffold_63866
Order: Sphingomonadales (66.67%)
3 1056 bp 66.10 2.60 100.57
SCNpilot_cont_500_bf_scaffold_63880 3 1056 bp 71.78 2.13 100.57
SCNpilot_cont_500_bf_scaffold_54175
Species: Herminiimonas arsenicoxydans (50%)
2 1226 bp 67.21 2.85 100.57
SCNpilot_cont_500_bf_scaffold_39935
Order: Rhizobiales (100%)
3 2264 bp 64.31 5.63 100.57
SCNpilot_cont_500_bf_scaffold_30978
Species: Nitrobacter winogradskyi (100%)
2 2434 bp 61.13 3.59 100.57
SCNpilot_cont_500_bf_scaffold_19031 3 2777 bp 59.27 6.48 100.58
SCNpilot_cont_500_bf_scaffold_64776
Genus: Methylobacterium (66.67%)
3 1041 bp 69.93 2.64 100.58
SCNpilot_cont_500_bf_scaffold_20846
Domain: Bacteria (100%)
3 2598 bp 67.24 3.56 100.58
SCNpilot_cont_500_bf_scaffold_55752
Genus: Mesorhizobium (66.67%)
3 1196 bp 62.54 2.93 100.59
SCNpilot_cont_500_bf_scaffold_55756
Species: Leifsonia xyli (66.67%)
3 1196 bp 71.82 2.93 100.59
SCNpilot_cont_500_bf_scaffold_40978
Species: Haliscomenobacter hydrossis (100%)
2 1536 bp 40.04 2.28 100.59
SCNpilot_cont_500_bf_scaffold_65897
Species: BJP_08E140C01_10KDA_Sphingomonadales_62_47 (66.67%)
3 1023 bp 61.78 2.93 100.59
SCNpilot_cont_500_bf_scaffold_47520
Phylum: Proteobacteria (66.67%)
3 1360 bp 68.82 3.86 100.59
SCNpilot_cont_500_bf_scaffold_56215
Species: BJP_08E140C01_Actinomycetales_67_18 (50%)
2 1187 bp 72.28 3.16 100.59
SCNpilot_cont_500_bf_scaffold_36240
Species: Rhodanobacter thiooxydans (50%)
2 1694 bp 69.66 11.22 100.59
SCNpilot_cont_500_bf_scaffold_48024 3 1348 bp 27.82 2.78 100.59
SCNpilot_cont_500_bf_scaffold_41885
Order: Burkholderiales (100%)
5 2189 bp 70.21 40.09 100.59
SCNpilot_cont_500_bf_scaffold_41931
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
2 1506 bp 59.03 3.98 100.60
SCNpilot_cont_500_bf_scaffold_57591
Species: R_Alphaproteobacteria_66_14 (100%)
2 1163 bp 69.48 5.37 100.60
SCNpilot_cont_500_bf_scaffold_29535
Genus: Novosphingobium (66.67%)
3 1992 bp 68.22 4.39 100.60
SCNpilot_cont_500_bf_scaffold_29642
Genus: Novosphingobium (100%)
3 1986 bp 62.94 4.15 100.60
SCNpilot_cont_500_bf_scaffold_57894
Species: Novosphingobium tardaugens (66.67%)
3 1157 bp 68.63 3.03 100.61
SCNpilot_cont_500_bf_scaffold_49252
Species: Pseudomonas denitrificans (50%)
2 1321 bp 69.34 3.22 100.61
SCNpilot_cont_500_bf_scaffold_58282
Species: Polymorphum gilvum (50%)
2 1151 bp 66.55 2.61 100.61
SCNpilot_cont_500_bf_scaffold_43227 3 1470 bp 59.46 2.04 100.61
SCNpilot_cont_500_bf_scaffold_50419
Species: uncultured marine microorganism HF4000_APKG5H11 (50%)
2 1297 bp 64.92 2.31 100.62
SCNpilot_cont_500_bf_scaffold_59336 3 1133 bp 67.17 3.53 100.62
SCNpilot_cont_500_bf_scaffold_43820
Species: Starkeya novella (50%)
2 1455 bp 64.05 3.26 100.62
SCNpilot_cont_500_bf_scaffold_50702
Species: R_Alphaproteobacteria_66_14 (100%)
2 1291 bp 63.52 3.68 100.62
SCNpilot_cont_500_bf_scaffold_25091
Species: Nitrobacter sp. Nb-311A (100%)
2 2257 bp 59.68 3.32 100.62
SCNpilot_cont_500_bf_scaffold_59797
Species: Mesorhizobium plurifarium (100%)
2 1124 bp 69.93 3.11 100.62
SCNpilot_cont_500_bf_scaffold_34606
Species: Paenibacillus sp. VKM B-2647 (50%)
2 1759 bp 56.05 8.24 100.63
Displaying items 36451-36500 of 37192 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.