ggKbase home page

SCNpilot_cont_500_bf_scaffold_60_10

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(9985..10824)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport system inner membrane component n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFE9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 279.0
  • Bit_score: 505
  • Evalue 3.40e-140
  • rbh
ABC-type sugar transport system permease component {ECO:0000313|EMBL:EYR83016.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 279.0
  • Bit_score: 505
  • Evalue 4.80e-140
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 276.0
  • Bit_score: 485
  • Evalue 8.80e-135
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGAGCACTGCTGCCCGGCGCTGGACCCTAACGCATACCATCGTGCTGGTCATCCTGACACTACATGTGTTGCTGGTGATCTTTCCCTTCATCTGGATGATCTACAGCACGTTCAAGACCAACAGGGAGTTTATGCGCTCGGTCTGGTCGTTCCCGACCAGCTTGAATTTCGATGCTTATATCGGTGCCTGGAGTGGCGGCGCGCTTGGCGGCTACGCGGTCAATTCGCTGATCATCATGGTCGGCGCGACATTGATCACGGTATTCGCCTCGACGCTTGCCGGTTACGCGCTGGCGATCTACCGGCCGCGCTGGATGCCGGTGCTGGAGCTGTCGTTGACCGCAGCGATGGCGATCCCCGCTTATGTGGCGCTGGTGCCGCTCGTTGTCATGCTGCGCAGCGTCGGCCTGCTGGACACGCATCTAGGCGTCATCCTGCCAACCGCCGCTTTCAATATACCCGTCTCGATCTTCATCATGCAGGCGTTCTTCAATACGCTGCCCCGCGAGCTTTTCGATGCAAGCCGTGTGGATGGTGCATCCGAATGGCGCATTTTCTACAAGATTGCGCTGCCGATTGCCCGACCGGCCATGTTCACGGCCGGCATCGTCAACATGATCTGGGTCTGGAACGATTTTCTGTTCCCGATGGTTTTCATCAACAATCCCTCGCGCAAGACACTGCCCGTCGGCCTCACCGATTTTGTCGGCGAGCACATCACCAACTATCCGGTCATGCTTGCAGCGATCCTGATTGCCGCAGTCGCACCGCTCGTTCTCTTCATCTTCTTTGAACGCCAGATCACGGCCGCGCTCGTGGGAGGCGCCGTGAAAGAATGA
PROTEIN sequence
Length: 280
MSTAARRWTLTHTIVLVILTLHVLLVIFPFIWMIYSTFKTNREFMRSVWSFPTSLNFDAYIGAWSGGALGGYAVNSLIIMVGATLITVFASTLAGYALAIYRPRWMPVLELSLTAAMAIPAYVALVPLVVMLRSVGLLDTHLGVILPTAAFNIPVSIFIMQAFFNTLPRELFDASRVDGASEWRIFYKIALPIARPAMFTAGIVNMIWVWNDFLFPMVFINNPSRKTLPVGLTDFVGEHITNYPVMLAAILIAAVAPLVLFIFFERQITAALVGGAVKE*