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SCNpilot_cont_500_bf_scaffold_278_20

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(22549..23904)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 452.0
  • Bit_score: 619
  • Evalue 3.70e-174
integral membrane sensor signal transduction histidine kinase; K07645 two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 435.0
  • Bit_score: 380
  • Evalue 6.40e-103
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U6I5_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 452.0
  • Bit_score: 616
  • Evalue 2.20e-173
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1356
ATGTCGATCCGGACAAGATTGTTTACCGTTCTGCTGTTGATGACAAGCATCGTCTGGTTGTCGGCCTGCGTCTGGATCTACACCAGCACGAAGGAGCGCCTTGAGCATGTCTTGGATGCCCGTCTCGCCGAGTCCGCAAAGATGGTGAGTTCGCTGGTCGGCGACCGCTCCGTCGTCATCGGGATGGGCGAACAGGAGCCCGCCACAGGGCGCGACCTCGAAATCGGATCTACGGTGGCGCCCTCCTACGAACGCCAGCTTGCGTGCCAGATCTGGTCGGTGAACGGCAAGCTGCTCAGCAAGTCCGACAGCGCGCCAGTCGCATCGCTCTCCGATCACGGATCCGGATTCCGGAACACCGTGATCAACGGCGCCGCTTGGCGCGTCTACGCAGTGATTAAACCCGACCTCGGAATAAGGGTTCTGGTCGGCGACAGCCTACAGGTGCGCGATCGGCTCGTCGACGATGTCATCAAGGGGCTGCTCTTTCCTGCCGTCCTCATCATGCCGCTTATGGCCGGTCTGATCTGGTTGTCCGTGTCCAAGGGGCTGGCGCCGTTGCAGAGACTGGCCGCCAGTCTCACCGCCCGTGATGCTTCGCAGCTTCATCCATTTGTCGACGACAAGACTCCCGCTGAGCTGCGGCCCATGATCCGGGCTTTGAATAGTCTTCTCTTCCGAGTCCAGTCTGCTCGTGAACGGGAACAGGAGTTCATCACCTATGCTGCCCATGAGCTTAAGACGCCGCTTGCCGGACTGAAGACGCAGGCGCAGGTTGCTATGCGGTCGAGTGATCGCGAAGTCCAGCAGCGGGCACTGAAACGAATCGAGCAGAGCGTCGACCGTACCAGCCGGATGGCGCGACAGCTCATCGATCTTGCGGCCGTCGATGCCGCCGAGGGAAGGGACAGGTCGGTAGAGGTCGACGTCGAGGCGCTGGTCCTCGACGTCGCCAACGACCTTGAGTCCTTGAAGAGGGTCCGCGACGTCGAGATCATCTGCAAGGCACCTCGGCTGCTTGGGGCTCTTTCCACCCGTGTCGACGCCTCGTTGCTGCGGCTTGCAATTCGAAATGTCCTCGAAAACGCCGTTCAGCATTCCCCGCGAGGTTCCATCGTCGAATGTATGGTGGAGACAGACGGAAGACGCATAACCGTTGTCGTTTCCGATGAGGGTCCCGGGATTGCTCTCGAAGAGCAGGGAAAGGTCTTGCAGCGCTTCTACCGGTCGCCACGCTCAGCTCCTGGAGGCAGCGGCCTTGGACTTGCGATTGTTAAGATGTCGATCGAGCGGCTTGGTGGTCGGCTCAGCTTCGCCAAACCTGGATCGCGCTTTGAGGTTTTGCTCGAAGTCTAA
PROTEIN sequence
Length: 452
MSIRTRLFTVLLLMTSIVWLSACVWIYTSTKERLEHVLDARLAESAKMVSSLVGDRSVVIGMGEQEPATGRDLEIGSTVAPSYERQLACQIWSVNGKLLSKSDSAPVASLSDHGSGFRNTVINGAAWRVYAVIKPDLGIRVLVGDSLQVRDRLVDDVIKGLLFPAVLIMPLMAGLIWLSVSKGLAPLQRLAASLTARDASQLHPFVDDKTPAELRPMIRALNSLLFRVQSAREREQEFITYAAHELKTPLAGLKTQAQVAMRSSDREVQQRALKRIEQSVDRTSRMARQLIDLAAVDAAEGRDRSVEVDVEALVLDVANDLESLKRVRDVEIICKAPRLLGALSTRVDASLLRLAIRNVLENAVQHSPRGSIVECMVETDGRRITVVVSDEGPGIALEEQGKVLQRFYRSPRSAPGGSGLGLAIVKMSIERLGGRLSFAKPGSRFEVLLEV*