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SCNpilot_cont_500_bf_scaffold_814_26

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 29396..30214

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Rhizobium sp. AP16 RepID=J2LIL9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 272.0
  • Bit_score: 452
  • Evalue 3.30e-124
  • rbh
Sulfonate ABC transporter {ECO:0000313|EMBL:KEA03339.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 272.0
  • Bit_score: 452
  • Evalue 3.60e-124
aliphatic sulphonate ABC transporter; K02050 NitT/TauT family transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 237.0
  • Bit_score: 426
  • Evalue 6.20e-117
  • rbh

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGAGCGCGATGATTGAGACTTCCGGCCGGACCCGCTTGCGGTGGCCTTCCGCAAGGCTGCGGCGGCTCGCCATACTCGCGACAGGCTTGATCTTTCCGCTCGGCCTATTGGGCCTCTGGTGGATCTCCTCCACCAGAGGCTGGCTGCCGGAGCAGATCCTGCCGGCGCCTGCCTATGTCTACCAGACGGGCCGGGACATGATCCTGAGCGGCGAGCTCCTCTATCATACCGGGGTCAGTCTGGGGCGCGTCATCGTCGGCTTCACGATCGGCGCAGGACTGGGGCTGCTTCTTGGCATCGCCATGGGGCTCTCCGAGAGGGTCGAGGATTATGTAAAGCCGCTTTTCCTCGCCTTTGCGCAGATCCCGACACTCGGATGGATCCCGCTGTTGATGCTGTTTGTCGGCATCGAGGAGACGTTGAAGATCATCATCATCGCCAAAGGCGCCATTGTGCCGATGACGCTGAATACGCTGACCGGAATTCGCGGCGTCTCGCCTAGATATATCGAGGTCGGCAGGGCATTGCGCTTCAGCCGCTGGCAGATGTTGCGGCTGATCATATTGCCCGGCGCCATCCCCTCGATATTCACCGGTATTCGCTACGGGCTGACGCATTCCTGGACGGCGCTGGTCGGGGTCGAGTTGCTCGCCTCCTCGGAAGGGCTTGGATACCTGCTGGTCTGGGGGCGACAGATGTTCTGGCTCGACACGGTCATCGTCGCGATGATCGCCATCGGGCTTGTCGGTTTCATCATGGACAAGGGGCTGGATCGCGTCGAGTTGTCGATCCAGCGCTGGAAGCGACAGGAGATCTGA
PROTEIN sequence
Length: 273
MSAMIETSGRTRLRWPSARLRRLAILATGLIFPLGLLGLWWISSTRGWLPEQILPAPAYVYQTGRDMILSGELLYHTGVSLGRVIVGFTIGAGLGLLLGIAMGLSERVEDYVKPLFLAFAQIPTLGWIPLLMLFVGIEETLKIIIIAKGAIVPMTLNTLTGIRGVSPRYIEVGRALRFSRWQMLRLIILPGAIPSIFTGIRYGLTHSWTALVGVELLASSEGLGYLLVWGRQMFWLDTVIVAMIAIGLVGFIMDKGLDRVELSIQRWKRQEI*