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SCNpilot_cont_500_bf_scaffold_946_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 1963..2304

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized HTH-type transcriptional regulator ydeP n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q6A1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 107.0
  • Bit_score: 184
  • Evalue 7.10e-44
Uncharacterized HTH-type transcriptional regulator ydeP {ECO:0000313|EMBL:CCM79499.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 107.0
  • Bit_score: 184
  • Evalue 9.90e-44
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 109.0
  • Bit_score: 131
  • Evalue 2.20e-28

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Taxonomy

Rhizobium mesoamericanum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGTCGGTCATCGGCGGATTGTGGAAGCCGACGATCTTGGTCAATCTGCTTTTGGGTAAGAAGCGATTCATGGAGTTGAGCCGACTGATCCCGGACGCCACGCAGCGCGTCCTCACGCTACAACTGCGTGAGCTTGAAGCAGATGGTCTGGTGACGCGTCGCGTGTTCCCCGAGGTGCCTCCGCGGGTCGAATACGAGGCGACCGACCTTGCACGATCAGTCGCTCCGATCCTGGCAAACCTGCGCGACTGGGGCAACAAGTTCCGCGATAGCCAGCAATGCCTTCCAGAACTCGTGCCCTATTGTCCAGCTGAAGATGCCAAGACAAAGCGAGCTATCTAG
PROTEIN sequence
Length: 114
MSVIGGLWKPTILVNLLLGKKRFMELSRLIPDATQRVLTLQLRELEADGLVTRRVFPEVPPRVEYEATDLARSVAPILANLRDWGNKFRDSQQCLPELVPYCPAEDAKTKRAI*