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SCNpilot_cont_500_bf_scaffold_28_132

Organism: SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(147757..148674)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UD43_CELFN similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 308.0
  • Bit_score: 407
  • Evalue 1.10e-110
  • rbh
RNA polymerase sigma 28 subunit FliA/WhiG; K02405 RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 308.0
  • Bit_score: 407
  • Evalue 3.30e-111
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 308.0
  • Bit_score: 407
  • Evalue 1.50e-110

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Taxonomy

Cellulomonas flavigena → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGACCACACCCTTGAGCGCGCCGGTCCGCTCGTCCGTGCGCACGGCCGAGCCGGCAGACCGCTATGCGGCCGGCACCGCCCCGCAGGGTGTCATCCCGCAGCAGCGCTCCGTCGCCGCAGGCACCGCCGTACCGACGGGTCCGGTCGCCGACGCCGTCCTGGACCTCGAGGCCACCTGGGTGACCTTCAAGGACACGGGCTGCCCCCAGGCGCGCGAGCGCCTGATCATGAACTTCGTGCCGCTGGTCACGGCCGTCGCCGGCCGGGTCGGGATGCGTCTGCCGAGCATGGTGGAGCACGCGGACCTGGTGTCCTACGGCATGTTCGGCCTGATCGACGCCATCGAGAAGTACGAGCTGGGTCGTTCCGTGAAGTTCGAGTCGTACGCGTCCTCGCGGATCCGCGGCGCGATCATCGACGAGCTGCGCGCGATGGACTGGGTGCCCCGCTCCGTCCGGACCAAGGCCCGCGCTGTCGACCGTGCCTACGGCGAGCTCGAGGCCACCCTGCACCGCTCACCGAGCGAGCACGAGGTGGCGGGCCACCTGCAGATGCCGGTCGAGGAGCTGCGCTCCGTGCTCGGGCAGCTGTCCTCCGTCAACGTGGCTGCGCTCGACGAGATGCTGGGTGGGGACGACCGGCCCGGCTCCGTGTCCCTCGGGGACACCCTCGGCGACGAGCGGTCGGAGGACCCTGCGCGGTCGGTGGAGGCGCAGGAGACCAAGTTCCTGCTGGCGCGGGCCATCGAGCAGCTCGGCGAGCGTGAGCGGATGGTCGTGGTCCTCTACTACTACGAGGGCATGACGCTGGCCGAGATCGGCCGGCTGCTCGGCGTGACCGAGTCCCGCATCTCGCAGATGCACACCGCGGCGATGGCCCGGCTCCGGACGCGACTGGTCGAGGCCGAGCGCGCCTGA
PROTEIN sequence
Length: 306
MTTPLSAPVRSSVRTAEPADRYAAGTAPQGVIPQQRSVAAGTAVPTGPVADAVLDLEATWVTFKDTGCPQARERLIMNFVPLVTAVAGRVGMRLPSMVEHADLVSYGMFGLIDAIEKYELGRSVKFESYASSRIRGAIIDELRAMDWVPRSVRTKARAVDRAYGELEATLHRSPSEHEVAGHLQMPVEELRSVLGQLSSVNVAALDEMLGGDDRPGSVSLGDTLGDERSEDPARSVEAQETKFLLARAIEQLGERERMVVVLYYYEGMTLAEIGRLLGVTESRISQMHTAAMARLRTRLVEAERA*