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SCNpilot_cont_500_bf_scaffold_33_149

Organism: SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(166973..167956)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628283 similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 311.0
  • Bit_score: 408
  • Evalue 8.70e-111
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 311.0
  • Bit_score: 407
  • Evalue 1.60e-110
rpoE; RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 312.0
  • Bit_score: 373
  • Evalue 9.70e-101

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 984
GTGGCGGAGGTGACGACGGGCACGGCGCTCGTCGCGGCGGTCGAGCCGTTGCGACGCGAGCTGGTGGTGCACTGCTACCGCCTGCTCGGCTCGGTGCACGAGGCGGAGGACGCCGTCCAGGAGACGATGCTGCGCGCCTGGCGTGCCGCCGAGCGGTACGACGCGGCACGCGCCTCCGTGCGGACCTGGGTGTACTCCATCGCGACGAACGTCTGCCTCACCGCACTGGACGGACGGGCCCGCCGTCCGCTCCCGTCAGGTCTCGGTGCGCCGAGCACCGATCCGGACGCCGTTCTCCGACCCGACCTCGACGTGCCGTGGCTGCAGCCGTTGCCGGACCGGTACGTGCGCACCGAGACGCAGGACCCGGCGGAGCGGTCGGCGGCGCGCCGCAGCGTGCGGCTCGCCCTGGTCGCGGCACTGCAGCTGCTGCCGCCGCGGCAGCGTGCGGTGCTGGTGCTGCGGGACGTCCTCGCGTTCACCGCTGCCGAGGTCGCGGCCCAGCTGGGCACGTCGACCGCCTCGGTGAACAGCGCGCTGCAGCGGGCGCGGGCCACGATCGCGACGGCTGCCCCGGAGGAGGACCTGCTCGGCGACCCGGACGACAGCTCCGTCCGTGACGTGGTCGAGCGGTACGTCGCGGCCTTCGAGGCGGCAGACGTCGACGGGCTGGTGCGGCTGCTCACCGCCGACGTGGTGCTCGAGATGCCGCCGGTGCCGCTCTGGTTCCTCGGTGCCGACGACTACGGCCGGTTCATCGCGCGCGTGTTCGCGAGGCGCGGGACGGGGTGGCGGATGCTGCCGCTGCGGGCCAACGGTCAGCCGGCCGTGGCGGCCTACGCCCCGGAGCCCGGCGGCGGGCATCGGCTCCACACGCTGCAGGTGCTCACCGTCGGGGCGCTGGGGATCGAGCGGAACGCCGTCTTCCAGGACGCGCAGGTGTTCGCGGCGTTCGAACTCGCCCCCGAGCTGCCGCCGCGCTGA
PROTEIN sequence
Length: 328
VAEVTTGTALVAAVEPLRRELVVHCYRLLGSVHEAEDAVQETMLRAWRAAERYDAARASVRTWVYSIATNVCLTALDGRARRPLPSGLGAPSTDPDAVLRPDLDVPWLQPLPDRYVRTETQDPAERSAARRSVRLALVAALQLLPPRQRAVLVLRDVLAFTAAEVAAQLGTSTASVNSALQRARATIATAAPEEDLLGDPDDSSVRDVVERYVAAFEAADVDGLVRLLTADVVLEMPPVPLWFLGADDYGRFIARVFARRGTGWRMLPLRANGQPAVAAYAPEPGGGHRLHTLQVLTVGALGIERNAVFQDAQVFAAFELAPELPPR*