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SCNpilot_cont_500_bf_scaffold_146_114

Organism: SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 122697..123626

Top 3 Functional Annotations

Value Algorithm Source
TIGR02957 family RNA polymerase sigma-70 factor n=1 Tax=Segniliparus rugosus ATCC BAA-974 RepID=E5XNG8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 315.0
  • Bit_score: 319
  • Evalue 2.90e-84
  • rbh
TIGR02957 family RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EFV14080.2}; TaxID=679197 species="Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae; Segniliparus.;" source="Segniliparus rugosus ATCC BAA-974.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 315.0
  • Bit_score: 319
  • Evalue 4.10e-84
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 308.0
  • Bit_score: 308
  • Evalue 2.80e-81
  • rbh

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Taxonomy

Segniliparus rugosus → Segniliparus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 930
GTGGCCGCCGATCCCGCGCTCGAGGAGTTCGAGGCGCACCGCGCTCGGCTGTTCGGCATCGCCTACCGGATGCTGGGCTCGGCCGCCGATGCCGACGACGTGCTGCAGGACGCCTGGCTGCGCTGGCAGGCGGTGGACCGGTCGGCGGTGCAGGCCCCCGCGGCCTTCCTCGCCCGGACGGTGACGAACCTCTGCCTCACGGCGCTGACGTCGGCCCGGGCCCGTCGTGAGGTCTACGTGGGTCCGAGGCTGCCCGAGCCGGTGCTGACCGGTCCGGCCGGCACGGACCTCGGCCCGCTCGACCACGCCGAGCAGCGGGACAGCGTGTCGTTCGCCCTGCTCACGGTGCTCGAGCGGCTGTCCCCGCCGGAGCGGGCGGCCTACGTGCTCCGGGAGGCCTTCGCCTACAGCGCGGCCGAGGTCGCGGAGCTGATCGGCACGTCGGAGGCCAACGTGCGCCAGCTGCACGCGAGGGCCCGGCGCCGCGTCTCCGGGGCAGGCGCGGGTGCGGCGCCGCGCGAGGCGGATCCGGCTCGCCTGCGCGAGCTGGTCGAGACGTTCCTCGACGCGTCCCGTGGCGGCGACCTGGCCGCGCTCGAGGCGCTGCTCAGCGAGGACGTCGTCGCGCGTGCCGACGGCGGCGGCGTCGTCAGCGCCGGCCGCCGGCCGGTGGAGGGCCGCGAGAAGGTGGCCCGCTACGTCACCGGTGTGGTGGACCGCTTCGCCGCCGGGCTGCAGCGGGTGCTCGTCGAGGTCAACGGCGTGCCGGCGGCGGCCTTCACCGACGGCACGAGCCTCCGGGCCGTGCTGGTGGTGCAGACGCGCGACGGCCGCGTGTCGGCGCTGGACCTGGTGCTGAACCCGGACAAGCTCGCCCACGCCGAGCGGCAGCTGTCACGGATCGGGGCGCTGCCTGGTCGTGAGGGGTGA
PROTEIN sequence
Length: 310
VAADPALEEFEAHRARLFGIAYRMLGSAADADDVLQDAWLRWQAVDRSAVQAPAAFLARTVTNLCLTALTSARARREVYVGPRLPEPVLTGPAGTDLGPLDHAEQRDSVSFALLTVLERLSPPERAAYVLREAFAYSAAEVAELIGTSEANVRQLHARARRRVSGAGAGAAPREADPARLRELVETFLDASRGGDLAALEALLSEDVVARADGGGVVSAGRRPVEGREKVARYVTGVVDRFAAGLQRVLVEVNGVPAAAFTDGTSLRAVLVVQTRDGRVSALDLVLNPDKLAHAERQLSRIGALPGREG*