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SCNpilot_cont_500_bf_scaffold_27_9

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(11875..12894)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcription regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B75363 similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 338.0
  • Bit_score: 462
  • Evalue 5.20e-127
  • rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:KHS44446.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 333.0
  • Bit_score: 464
  • Evalue 1.10e-127
LacI family transcription regulator; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 332.0
  • Bit_score: 453
  • Evalue 4.50e-125

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
GTGGCCAATCGTGAGCCCAAGCCGACGATCAATGATGTGGCGCGCCTGGCGGGTGTGTCGAAAAAGACCGTCAGCCGCGTGATCAACAACTCGCCCTTGCTCAACGATGCAACGCGCGACAAGGTGACGGCGGTGATCCGCGATCTGGGCTATGTGCCCAATCCGCAGGCGCGGGCCTTGGCTTTGCGGCGCAATTTCCTGATCGGCCTGATCCACGACAACCCCAATGCGCAGATGGTCCTGTCGGTTCAGGAAGGCATGCTGGATGCGATGAAGGGCACCGAATTCGCGCTGGTCGTGCGCCCGGTGGACCGCAAGAGCCCGCATCTGTTCGACGATATCCGCCATTTCATCGAGCAGCAGCGGCTTTACGGCATTTACGTCCTGCCACCGGTTTCTGAAAATGACGAAGTGGCCCGGCTCTGCGCCGAACTGGGCTGCCGCTATGTGCGGATGGGCTCGGCGCGGCTGGATGATGAAGAGCACCTGGTCGAATCGAATGACCGCGAGGCCGTGCGCGAGGCGGTCGATAAGCTGATTCGCGATGGACACACACGCATCGGCCATGTTGCGGGGCCTGATGGCTTCCGCTCGGCGCGCGAGCGTGAGGCGGGGTTGCGTGAGGCGCTTTTGGCGCACGGTCTGAGCCTGCCTGACGAATTGCGGGCATCGGGCAATTACACTTTCGATTCGGGCTATACCGCCGCCAAGCAGGTGTTGAGCCAAAATCCGCGCCCGACCGCGATCTTTGCCGCTAATGACGAGATGGCCGCCGCCGTGCTCCACGCCGCATTGGAGCAGGGGCTGGAAGTGCCGCGCCAGCTCTCGATTCTGGGCTTCGACGATACGCCGATCGGCGCGCATATCTGGCCTCCGCTCAGCACGGTGCGCTGGCCGATCCGGGCGATGGCGCGTTCGGCGGCTTTCAAGCTGATCCAGCCGGAGAGGGCGGCCGAACACAAGTCTTTCTTCCGTTCCGAACTGGTCGAACGGGCCTCGACAGCGCCGCTCAAGGGCTGA
PROTEIN sequence
Length: 340
VANREPKPTINDVARLAGVSKKTVSRVINNSPLLNDATRDKVTAVIRDLGYVPNPQARALALRRNFLIGLIHDNPNAQMVLSVQEGMLDAMKGTEFALVVRPVDRKSPHLFDDIRHFIEQQRLYGIYVLPPVSENDEVARLCAELGCRYVRMGSARLDDEEHLVESNDREAVREAVDKLIRDGHTRIGHVAGPDGFRSAREREAGLREALLAHGLSLPDELRASGNYTFDSGYTAAKQVLSQNPRPTAIFAANDEMAAAVLHAALEQGLEVPRQLSILGFDDTPIGAHIWPPLSTVRWPIRAMARSAAFKLIQPERAAEHKSFFRSELVERASTAPLKG*