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SCNpilot_cont_500_bf_scaffold_27_20

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(26152..27165)

Top 3 Functional Annotations

Value Algorithm Source
dihydrouridine synthase TIM-barrel protein nifR3; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 329.0
  • Bit_score: 546
  • Evalue 6.60e-153
  • rbh
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 329.0
  • Bit_score: 546
  • Evalue 2.90e-152
tRNA-dihydrouridine synthase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G707_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 329.0
  • Bit_score: 546
  • Evalue 2.10e-152
  • rbh

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Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGACAGACACTCCCACCCCCCCCACTCTGAAGCCGATCCATATCGGCCCTGTCCAGATCGATTGCCCCGTGGTGCTGGCGCCGATGACGGCTGTCACCGATCTGCCGTTTCGGCGCATCGTGCGGCGCTATGGTTCGGGGTTGAACGTGACCGAGATGATCGCCAGCCCGGCCGCGATCCGCGAAACGCGCCAGTCGATCCAGAAGGCCGCGTGGGATCCGATGGAGGAGCCGGTCTCGATGCAGCTCGTCGGCTGCGAGCCGGACCAGATGGCCGAGGCGGCCAAGATCGCGGCTGACAAGGGCGCCGCCATCATCGACATCAATATGGGCTGTCCGGTGAAGAAGGTGGTTAATGGCGATGCCGGTTCGGCGCTGATGCGCGTGCCCGATCTGGCCGCGCGGTTGATCGAGGCCTGTGTCAAGGCGGTGGATGTGCCCGTCACGGTCAAGATGCGGATGGGCTGGTGTCATGACAGCCTCAATGCTCCCGAACTGGCGCGCACCGCGCAGGATCTGGGCGCGAAGATGATTACGGTCCATGGACGTACCCGCAATCAGATGTACAAGGGCAGTGCCGACTGGGCCTTTGTTCGCCGGGTGAAGGAGGCGGTCGATATTCCCGTCATCGTCAATGGCGACATTTGCACGATCGAGGACGTGGCCGCCGCTGTCGAGCAATCGGGCGCCGATGGCGTGATGATCGGGCGGGGATCCTATGGGCGGCCCTGGCTGCTGGGTCAGATGATGCATTGGCTGGCGACGGGCGAGCGTCTGGACGAGCCTTCGCTGGCCGAGAAATATGGCGTTATTCTCGAACATTACGAGGATATGCTCGCCCATTATGACATCAAGACCGGCGTCAATATGTTCCGCAAGCATATCGGCTGGTACACGCACGGCCTGCATGGGTCGGCCTCGTTTCGCAACAAGGCCAATTTCATGGATGACCCGCGCGACGTAAAAGCCGCGCTCCACGAATTTTTCACGCCGCTGCTGCAAGACGCGGCCTGA
PROTEIN sequence
Length: 338
MTDTPTPPTLKPIHIGPVQIDCPVVLAPMTAVTDLPFRRIVRRYGSGLNVTEMIASPAAIRETRQSIQKAAWDPMEEPVSMQLVGCEPDQMAEAAKIAADKGAAIIDINMGCPVKKVVNGDAGSALMRVPDLAARLIEACVKAVDVPVTVKMRMGWCHDSLNAPELARTAQDLGAKMITVHGRTRNQMYKGSADWAFVRRVKEAVDIPVIVNGDICTIEDVAAAVEQSGADGVMIGRGSYGRPWLLGQMMHWLATGERLDEPSLAEKYGVILEHYEDMLAHYDIKTGVNMFRKHIGWYTHGLHGSASFRNKANFMDDPRDVKAALHEFFTPLLQDAA*