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SCNpilot_cont_500_bf_scaffold_65_6

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 4516..5769

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V0B9_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 401.0
  • Bit_score: 540
  • Evalue 1.90e-150
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 401.0
  • Bit_score: 540
  • Evalue 5.80e-151
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADU34433.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 401.0
  • Bit_score: 540
  • Evalue 2.60e-150

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1254
ATGCCGGGCATCTTCTTCGTGGGGCCTAGTCCGAGTCTGTCCATGCTTCGCACATCGCTTGCTTCCGGTTTCCTCGGTTTGTCGATCCTGCTGGCCGCGCCCGCGCACGCCGCCGACCCGCTGCGCATCGGCGAGATCAACAGCTACAAGGCGCAGCCCGCCTTCCTCGAACCCTACCGCAAGGCCATGCTGCTGGCCCTGGAGGAAGTCAATGCCGCCGGCGGCGTGAACGGGCGTCCGCTGGAGCTGTTGATCCGGGACGACAACGGCGTGCCGGGCGACGCGGTGCGCGCGGCCGAGGAACTGGTCTCGCGCGAACGCGTGGCGATGCTGGCCGGCGGCTTCCTGTCCAACATCGGCCTGGCGCTGGGCGACTATGCCCGGCAGCGCAAGGTGCCGTTCCTGGCCAGCGAGCCGCTGACCGACAAGATCACCTGGGCCAATGGCAACCGCTATACCTTCCGCCTGCGGCCGTCGACCTGGATGCAGGTGTCGATGCTGGTGCCCGAGGCGGCCAAGCTGGGCAAGAAGCGCTGGGCCATCGTCTATCCGAACTACGAGTACGGGCAGTCGGCGGTGCAGACCTTCAAGACGCTGCTCCAGGCCGCGCAGCCTGGCGTCGAGTTCGTGACCGAGCAGGCCACGCCGCTCGGCAAGCTCGATGCGGGACCCGTCGTGCAGGCGCTGGAGGCCAGCAAGCCGGACGCAATCTTCAACGTGCTGTTCGCCACGGACCTGACCAAGTTCGTGCGCGAGGGCGCCACGCGCGGCCTGTTCAAGGGCCGTGAAGTGGTCAGCCTGCTATCGGGCGAGCCCGAGTACCTGGAGCCGCTGAAGGACGAGGCGCCCGAGGGCTGGATCGTGACGGGCTATCCCTGGTATGCGATCAAGACGCCCGAGCACCAGCGCTTCCTGGATGCCTATCGGAAGAAGTATGGCGAGCCGTCGCGCCAAGGCTCGGTGGTGGGCTACGTGACCATCCATGCAGCGGCCGAGGCGCTGCGGCGCGCGGGCAGCACCAATGCCGAGAAGATCGTCGATGCGTTCCGCAACATGCCGCTGTCCTCGCCGTGGGGACCCATCGTGTTCCGCGCGCAGGACAATCAATCGACGCTGGGCGCTTTCGTCGGGCGGACCGCGCTGCAGGGCAGCGGGGCGCAGCGCACGGGCGTCATGGTGGACTTCCGCTATGCCGACGGCGCCAGGTACCAGCCCACCGATGCCGAGGTGGCGAAGCTGCGGCCGGCGCGCTGA
PROTEIN sequence
Length: 418
MPGIFFVGPSPSLSMLRTSLASGFLGLSILLAAPAHAADPLRIGEINSYKAQPAFLEPYRKAMLLALEEVNAAGGVNGRPLELLIRDDNGVPGDAVRAAEELVSRERVAMLAGGFLSNIGLALGDYARQRKVPFLASEPLTDKITWANGNRYTFRLRPSTWMQVSMLVPEAAKLGKKRWAIVYPNYEYGQSAVQTFKTLLQAAQPGVEFVTEQATPLGKLDAGPVVQALEASKPDAIFNVLFATDLTKFVREGATRGLFKGREVVSLLSGEPEYLEPLKDEAPEGWIVTGYPWYAIKTPEHQRFLDAYRKKYGEPSRQGSVVGYVTIHAAAEALRRAGSTNAEKIVDAFRNMPLSSPWGPIVFRAQDNQSTLGAFVGRTALQGSGAQRTGVMVDFRYADGARYQPTDAEVAKLRPAR*