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SCNpilot_cont_500_bf_scaffold_93_65

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 74469..75350

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Chryseobacterium sp. CF314 RepID=J2SVH7_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 293.0
  • Bit_score: 473
  • Evalue 2.00e-130
  • rbh
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EJL69582.1}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 293.0
  • Bit_score: 473
  • Evalue 2.80e-130
mexE; MexE; K03585 membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 293.0
  • Bit_score: 433
  • Evalue 4.20e-119
  • rbh

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Taxonomy

Chryseobacterium sp. CF314 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 882
TTGGAGAAGATTTTCGTTGATGAAGGCCAATATGTGCGTGCCGGACAAACGCTTTTCCAGATTATGCCACAAATTTATCAGGCAGAATATATGAAAGCCGCTGCGGAAGTGGAGCAGGCCAAAATTGAACTTCAAAATGCATCCACTTTAGCCAGCAACAACATTGTTTCGAAAAATGAAAGAGCAATGGCCAAAGCAAAATTAGACGCAGCAAATGCTGAAGCACGTTTAGCACAAATTCACCTTTCCTTCACCAATGTTCGTGCTCCTTTTTCAGGAATCATCAACCGCCTTCCACTTAAATTGGGAAGCTTAGTAGATGAGGGCGACTTGCTCACCACACTTTCTTATAATGACCAAATATACACCTACTTTAATGTTTCGGAACCTGAATATCTGGATTACCAAACGCACATTGCAGAAAGAGGCGATCAGCATGTAGATTTGGTGATGGCCAATGGTGATGTTTTTCCGCAACAGGGAATTGTTCAAACCATCGAAGGCGAGTTCGATAATGAAACCGGAAATATTGCTTTTCGTGCGAAGTTTCCTAATCCTCAAAAGCTTTTGAGGAATGGTGAAACCGGAAAAATCCGGATGAATGTTCCGGTTAAGAATGCGCTCATTATTCCTCAGAAAGCCACTTATGAAATTCAGGATCAGACCTATGTTTTTGTGGTTGATAAAAACGGAAACTTAAAATCCCGAAACATTAAAATTGCTTACGAGCTACCTGATATCTACATTGTTTCTGAAGGTCTGAAGCCAGGTGAAAAATTCCTGATAGAAGGAGTTCAGAAGGTAAAAGACGGACAAAAAGTACAATTGAAGTATCAGGATCCACAGCAAGTGATGAAGTCTTTAAAACTGAATGCTGATTAA
PROTEIN sequence
Length: 294
LEKIFVDEGQYVRAGQTLFQIMPQIYQAEYMKAAAEVEQAKIELQNASTLASNNIVSKNERAMAKAKLDAANAEARLAQIHLSFTNVRAPFSGIINRLPLKLGSLVDEGDLLTTLSYNDQIYTYFNVSEPEYLDYQTHIAERGDQHVDLVMANGDVFPQQGIVQTIEGEFDNETGNIAFRAKFPNPQKLLRNGETGKIRMNVPVKNALIIPQKATYEIQDQTYVFVVDKNGNLKSRNIKIAYELPDIYIVSEGLKPGEKFLIEGVQKVKDGQKVQLKYQDPQQVMKSLKLNAD*