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SCNpilot_cont_500_bf_scaffold_93_80

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(89629..90495)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X620_FLAB3 similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 288.0
  • Bit_score: 555
  • Evalue 3.90e-155
  • rbh
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIA83514.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 288.0
  • Bit_score: 557
  • Evalue 8.40e-156
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 288.0
  • Bit_score: 555
  • Evalue 1.20e-155
  • rbh

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Taxonomy

Chryseobacterium solincola → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 867
ATGAGACAGCTAAAAATTACAAAACAGGTTACCAATCGGGAAACCGCATCACTTGACAAGTATCTGCAGGAAATTGGGAAAGTAGACCTGATTACCGCTGATGAAGAGGTGGAACTGGCCCAAAAGATTCGTGCCGGAGATCGGGTTGCGCTTGAAAAACTAATTAAAGCGAATTTGCGTTTCGTGGTTTCTGTTTCTAAACAGTATCAGAATCAGGGACTTTCGCTTCCCGACCTTATTAACGAGGGAAATCTTGGGTTGATGAAGGCCGCGAAAAGATACGACGAAACGAGAGGTTTTAAATTCATTTCGTATGCCGTTTGGTGGATTCGTCAGTCAATTTTGCAGGCATTGGCCGAGCAGTCCAGAATTGTGCGTCTTCCGCTGAACAAGATTGGTTCTATCAACAAAATCAACAAGGCGTATGCGCACCTGGAGCAGGAAAATGAAAGACCACCTTCTCCGGAAGAATTGGCTGAAGTGCTGGATATGAGTGAGGAAGACATCAAGGAATCCATGAAAAATTCCGGTCGTCACTTGTCGATGGATGCACCGCTTGTGGAAGGTGAAGACTCTAACCTTTATGACGTTTTACGCTCCGGAGAATCTCCAAGCCCGGATAAGGATTTGATGTTGGAATCGCTTCAAATTGAGATTGAACGTGCCTTGCAGACCCTAACGCCAAGAGAAGCCGATTTGGTGAGACTGTATTTCGGTCTTAACGGTAAACATCCGATGACGTTAGAAGAAATTGGTGAAACCTTCGATCTTACCCGTGAACGCGTACGACAAATCAAGGAAAAAGCGATCAAACGTTTGAAGCACAATACCCGAAGTAAGATTTTGAAATCTTATCTTGGTAAATAG
PROTEIN sequence
Length: 289
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQKIRAGDRVALEKLIKANLRFVVSVSKQYQNQGLSLPDLINEGNLGLMKAAKRYDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNKIGSINKINKAYAHLEQENERPPSPEELAEVLDMSEEDIKESMKNSGRHLSMDAPLVEGEDSNLYDVLRSGESPSPDKDLMLESLQIEIERALQTLTPREADLVRLYFGLNGKHPMTLEEIGETFDLTRERVRQIKEKAIKRLKHNTRSKILKSYLGK*