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SCNpilot_cont_500_bf_scaffold_306_15

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 14540..14884

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Riemerella columbina RepID=UPI0003766454 similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 114.0
  • Bit_score: 223
  • Evalue 8.10e-56
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 114.0
  • Bit_score: 223
  • Evalue 1.10e-55
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 114.0
  • Bit_score: 218
  • Evalue 1.40e-54

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Taxonomy

Chryseobacterium indologenes → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 345
ATGCCAAGATCAGTAAATGCAGTAGCTTCTAGAGCTCGCAGAAAAAAAGTAATGAAGCAGGCAAAAGGTTTTTTCGGTAGAAGAAAAAACGTTTGGACTGTTGCTAAAAACGCCGTGGAAAAAGCAATGCAATATGCTTACCGCGGTAGAAAAGAGAAGAAAAGAATTTTCCGTTCACTATGGATTACCCGTATTAATGCAGGTACCAGAGAGCATGGTATGTCTTACTCCCAATTTATGGGCGCTCTGAAAAAAAACAACATCGAACTGAATAGAAAAGTTTTAGCTGATTTAGCAATGAATCATCCAGAAGCTTTCAAAGCAGTTGTAGATCAAGTAAAATAA
PROTEIN sequence
Length: 115
MPRSVNAVASRARRKKVMKQAKGFFGRRKNVWTVAKNAVEKAMQYAYRGRKEKKRIFRSLWITRINAGTREHGMSYSQFMGALKKNNIELNRKVLADLAMNHPEAFKAVVDQVK*