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SCNpilot_cont_500_bf_scaffold_306_88

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 103510..103758

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FBP6_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 80.0
  • Bit_score: 116
  • Evalue 1.30e-23
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 80.0
  • Bit_score: 116
  • Evalue 4.10e-24
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABQ07379.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 80.0
  • Bit_score: 116
  • Evalue 1.80e-23

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Taxonomy

Flavobacterium johnsoniae → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 249
ATGAAAATAAATCGATTAGATGAAGAATTTTCTAGCAGGAAAGTCAAGAATCGAGTGATTGCAAAATACTTTGGCAAAAGTGAATCAACTATTTCACTATGGCGCAATAACAAAAGACAGCCATCATTACCAGAGCTAAGAGAAATTGCAAAACTTCTTAGAATTGACATCAAAGATTTACTTGAGCCAACCGACTGGAAAAAGGAAAAATCTCATACCTATGAAGAATTTTCAGATAAACTGAAATAA
PROTEIN sequence
Length: 83
MKINRLDEEFSSRKVKNRVIAKYFGKSESTISLWRNNKRQPSLPELREIAKLLRIDIKDLLEPTDWKKEKSHTYEEFSDKLK*