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SCNpilot_cont_500_bf_scaffold_379_2

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(978..1520)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1G0_FLAB3 similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 180.0
  • Bit_score: 304
  • Evalue 7.40e-80
  • rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 180.0
  • Bit_score: 305
  • Evalue 6.10e-80
16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 180.0
  • Bit_score: 304
  • Evalue 2.30e-80
  • rbh

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Taxonomy

Chryseobacterium solincola → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 543
ATGAAAAAAGAAGACTGCTATTTTTTGGGAACCATCACACGCCGCCACGGTTTGCAGGGAAACGTATTCCTTAAACTCGATACCGACCAGCCGGAAATGTACAACAAGCTCGATTCTGTTTTTGTTGAAATCAATGGTTTGTTGGTGCCCTTTTTTATTTCCAAACAATCCTGGAGCAAAAATGATACGCTTATAATTTCTTTTAAAAATACCACCGACACTCTGATCGATCAGTCGCTCGGGAAAGGTGTATATCTGCCGCTTTCCACATTGCCGCCGCTTTCAGGGAAAAAGTTTTATTATCACGAAGTAATTGGGTTTGAGGTGTGCGAAACAGATGGAAAAACCTGTGGCCAAATACAATCTGTGAACGACCAAACAGCGCAGCATTATTTTATCCTCGATCTTGCCGGTAAGGAGGTGATTATCCCGATTATCCGAGATTGGATTTTAGAAGTAAACCGCGACGATAAAGTGATTACCATGTCACTGCCTGAAGGATTAATGGATGTGTTCCTGGTGCCGTCCAAAAAAGATGAGTAA
PROTEIN sequence
Length: 181
MKKEDCYFLGTITRRHGLQGNVFLKLDTDQPEMYNKLDSVFVEINGLLVPFFISKQSWSKNDTLIISFKNTTDTLIDQSLGKGVYLPLSTLPPLSGKKFYYHEVIGFEVCETDGKTCGQIQSVNDQTAQHYFILDLAGKEVIIPIIRDWILEVNRDDKVITMSLPEGLMDVFLVPSKKDE*