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SCNpilot_cont_500_bf_scaffold_379_60

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 55749..56951

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FSV7_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 402.0
  • Bit_score: 535
  • Evalue 4.40e-149
  • rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EEI94081.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 402.0
  • Bit_score: 535
  • Evalue 6.20e-149
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 402.0
  • Bit_score: 438
  • Evalue 3.00e-120
  • rbh

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Taxonomy

Sphingobacterium spiritivorum → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1203
ATGAACAGTAATTTAGAAATAAATTACAGAGCATTATATGGAAAGCTGTTTTCGGGTTTACTAAACCTGTTTGGTACAAATTACGTTTCTGAAATTGAGGACGCTATTCAAAATTCATTTTTGAAATCCTTGAAAGTTTGGACAAAAACTAATGTTCCTAATAACAAAGAAAATTGGCTTTTCATAGTGGCTCGTAACGATGTGTTGAACCAAATTAAAAAACAAAACGAAAATCATAATTTTTCGGTAGAACAAATTGAAGAAACTTTACCAATCGGCAACGAAACTGATTTACGGATTCAAACAATTGTCTTCATTGCTTCTCTGGGAAATGTTTCAAATCAAGCCAAAATACTTTTTGCCCTCAAAAATATTTTCGGTTTAAGCATAGCAGAAATAAGCAGCAGTACTTTAATTAATCAGGAAGCCATTTACAAAAGCATAAACCGAACAAAGAAAGACATTCAGCTTGAGTTTAACGGCAATACAGTTGACCTGAATACAATTTCAGCTAATCAACGAGCTATTGCCATTGCGGAAGAAATTTTTTATGCAGTTTTCAATATCGGTTTTGACTCTTTTAGCGAAAAGACGGAAAATATTGTAAATGAAGATTTATGTTTGGAAGCATTTGCTTTGACAAAATTTTTGTTCAGTCAATATCAAAGTGTTTCAACAAGCAATCTGTTGGCTCTTTTTTGTTTTCATATTGCAAGAATTCCTGCAAAAATTGATGATGAAAAGCTCATTTCATTTTTCAATCAAAATCGTGAAAAATGGAATAAAGAATTGCTCAACTTGGGCTTTCATTATCTCATAAAGCCGAAAGAAATAAGCAAGTTTTATCTTGAAGCGGTCATTGTCATTAAGTATATGTCGATAAGCCAATTAACGCAAAACGATTGGAATGATATTGTAAAACTCTATGAATTGATGCAACAAGTTTCGCAGTCGCCTATTGTAAAACTTAACTATTGTTTTTGTTTAAGCAAAATTGGCAAAACCGATGATGCATTGAAGATTCTTTCGAAAATTGAAAAAGAGTTACCCAACGAACACGTCTATTTTTCTTTGGTAAAAGCGAAAATTCTAAAAGAAATCAATCCTAAAGAATCCGATCATTTATTCATCTCGGCTATGAATAAAATGAACCAAAAAATCAGAAAAGAATATTTATTAGGAAACGAACTAATCCGATTATAA
PROTEIN sequence
Length: 401
MNSNLEINYRALYGKLFSGLLNLFGTNYVSEIEDAIQNSFLKSLKVWTKTNVPNNKENWLFIVARNDVLNQIKKQNENHNFSVEQIEETLPIGNETDLRIQTIVFIASLGNVSNQAKILFALKNIFGLSIAEISSSTLINQEAIYKSINRTKKDIQLEFNGNTVDLNTISANQRAIAIAEEIFYAVFNIGFDSFSEKTENIVNEDLCLEAFALTKFLFSQYQSVSTSNLLALFCFHIARIPAKIDDEKLISFFNQNREKWNKELLNLGFHYLIKPKEISKFYLEAVIVIKYMSISQLTQNDWNDIVKLYELMQQVSQSPIVKLNYCFCLSKIGKTDDALKILSKIEKELPNEHVYFSLVKAKILKEINPKESDHLFISAMNKMNQKIRKEYLLGNELIRL*