ggKbase home page

SCNpilot_cont_500_bf_scaffold_91

Search features with annotation key words

Displaying items 121-150 of 631 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_91_121
unknown

Not on your lists

comp(133575..133814)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_91_122
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134241..135248
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037BDA59
Membrane protein {ECO:0000313|EMBL:KGE09333.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
putative Ca2+/Na+ antiporter; K07301 inner membrane protein
SCNpilot_cont_500_bf_scaffold_91_123
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135302..136354
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU75_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00480.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_cont_500_bf_scaffold_91_124
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136397..139357
DNA (2961bp) protein (987aa)
Transposase Tn5044 n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L7T5_STEMA rbh
Transposase Tn5044 {ECO:0000313|EMBL:EQM88072.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
Tn5044 transposase rbh
SCNpilot_cont_500_bf_scaffold_91_125
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139551..141332
DNA (1782bp) protein (594aa)
TonB-dependent receptor n=1 Tax=mine drainage metagenome RepID=T1B0V5_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:AHX16286.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
outer membrane receptor protein rbh
SCNpilot_cont_500_bf_scaffold_91_126

Not on your lists

141502..144789
DNA (3288bp) protein (1096aa)
Glycosyl hydrolase BNR repeat-containing protein n=2 Tax=mine drainage metagenome RepID=T1C3I3_9ZZZZ rbh
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:EQD75448.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
BNR/Asp-box repeat protein rbh
SCNpilot_cont_500_bf_scaffold_91_127
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145114..148293
DNA (3180bp) protein (1060aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDE25 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN44957.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_91_128
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148332..150017
DNA (1686bp) protein (562aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RIL3_DESPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADW16422.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
SCNpilot_cont_500_bf_scaffold_91_129
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150251..150784
DNA (534bp) protein (178aa)
Putative reductase protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MEZ2_RHISN
Deaminase/reductase {ECO:0000313|EMBL:AHX13534.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative reductase protein
SCNpilot_cont_500_bf_scaffold_91_130
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150837..151682)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUJ8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90889.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein; K13472 sulfotransferase
SCNpilot_cont_500_bf_scaffold_91_131
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151765..152793)
DNA (1029bp) protein (343aa)
LacI family transcriptional regulator n=1 Tax=Dyella japonica RepID=UPI0002FB9F5F rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:AIF45950.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_91_132
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152797..155502)
DNA (2706bp) protein (902aa)
beta-mannosidase; K15855 exo-1,4-beta-D-glucosaminidase [EC:3.2.1.165] rbh
Glycoside hydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUJ6_9GAMM rbh
Glycoside hydrolase {ECO:0000313|EMBL:EIL90887.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_500_bf_scaffold_91_133
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155507..156949)
DNA (1443bp) protein (481aa)
Amino acid permease-associated region n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU31_9GAMM rbh
Amino acid permease-associated region {ECO:0000313|EMBL:EIL90722.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amino acid permease-associated region rbh
SCNpilot_cont_500_bf_scaffold_91_134
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157101..160310)
DNA (3210bp) protein (1070aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUJ5_9GAMM rbh
TonB-dependent receptor {ECO:0000313|EMBL:EIL90886.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
TonB-dependent receptor
SCNpilot_cont_500_bf_scaffold_91_135
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160551..161615)
DNA (1065bp) protein (355aa)
Glucokinase {ECO:0000313|EMBL:EIL90885.1}; EC=2.7.1.2 {ECO:0000313|EMBL:EIL90885.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2]
Glucokinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUJ4_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_91_136
Gordonia hirsuta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(161895..162113)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Gordonia hirsuta DSM 44140 = NBRC 16056 RepID=L7LBZ2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC57582.1}; TaxID=1121927 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia hirsuta DSM 44140 = NBRC 16056.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_91_137
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162113..163762)
DNA (1650bp) protein (550aa)
Phosphoglucomutase {ECO:0000313|EMBL:EIL90873.1}; EC=5.4.2.2 {ECO:0000313|EMBL:EIL90873.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphoglucomutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUI2_9GAMM
phosphoglucomutase, alpha-D-glucose phosphate-specific
SCNpilot_cont_500_bf_scaffold_91_138
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163762..165399)
DNA (1638bp) protein (546aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
glucose-6-phosphate isomerase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037F6897
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_91_139
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165396..166502)
DNA (1107bp) protein (369aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
transaldolase n=1 Tax=Methylobacter marinus RepID=UPI00035F6325 rbh
transaldolase
SCNpilot_cont_500_bf_scaffold_91_140
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166507..167205)
DNA (699bp) protein (233aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IVM2_9GAMM
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:EGW21759.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
haloacid dehalogenase domain-containing protein hydrolase
SCNpilot_cont_500_bf_scaffold_91_141
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167202..168599)
DNA (1398bp) protein (466aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
glucose 6-phosphate dehydrogenase n=1 Tax=Dyella ginsengisoli RepID=UPI00034CA1BC rbh
SCNpilot_cont_500_bf_scaffold_91_142
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(168599..172375)
DNA (3777bp) protein (1259aa)
glycosyltransferase; K13688 cyclic beta-1,2-glucan synthetase [EC:2.4.1.-]
Glycosyltransferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P6W0_AZOS1
Tax=RBG_16_RIF_CHLX_70_13_curated
SCNpilot_cont_500_bf_scaffold_91_143
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172564..173469
DNA (906bp) protein (302aa)
6-phosphogluconate dehydrogenase, decarboxylating (EC:1.1.1.44)
6-phosphogluconate dehydrogenase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRT4_9GAMM
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:AHX13232.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_500_bf_scaffold_91_144
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173469..174194
DNA (726bp) protein (242aa)
6-phosphogluconolactonase {ECO:0000313|EMBL:GAO33409.1}; EC=3.1.1.31 {ECO:0000313|EMBL:GAO33409.1};; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
6-phosphogluconolactonase; K01057 6-phosphogluconolactonase [EC:3.1.1.31]
6-phosphogluconolactonase n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XCR7_METSD
SCNpilot_cont_500_bf_scaffold_91_145
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174214..174771)
DNA (558bp) protein (186aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Oligoribonuclease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN92_9GAMM
oligoribonuclease (3'->5' exoribonuclease)
SCNpilot_cont_500_bf_scaffold_91_146
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174855..176309
DNA (1455bp) protein (485aa)
Exodeoxyribonuclease I {ECO:0000256|PIRNR:PIRNR000977}; EC=3.1.11.1 {ECO:0000256|PIRNR:PIRNR000977};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
exonuclease I (EC:3.1.11.1)
Exonuclease I n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN93_9GAMM
SCNpilot_cont_500_bf_scaffold_91_147
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176311..176997
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003128FE4
Uncharacterized protein {ECO:0000313|EMBL:KJV32559.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
TIGR02453 family protein
SCNpilot_cont_500_bf_scaffold_91_148
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177000..177797
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AWW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KFN45327.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_91_149
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177940..178665
DNA (726bp) protein (242aa)
Aquaporin Z n=1 Tax=Rhodanobacter denitrificans RepID=M4NNH9_9GAMM
MIP family channel protein
Aquaporin Z {ECO:0000256|HAMAP-Rule:MF_01146}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_91_150
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178704..179669)
DNA (966bp) protein (322aa)
Elongation factor P--(R)-beta-lysine ligase {ECO:0000256|SAAS:SAAS00088906}; EC=6.3.1.- {ECO:0000256|SAAS:SAAS00088909};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Lysyl-tRNA synthetase-like protein GenX n=1 Tax=Rhodanobacter denitrificans RepID=M4NGN0_9GAMM
lysyl-tRNA synthetase-like protein GenX
Displaying items 121-150 of 631 in total

View Taxonomy