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SCNpilot_cont_500_bf_scaffold_341

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Displaying items 121-150 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_341_121
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129652..130935)
DNA (1284bp) protein (428aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Sphingomonas melonis RepID=UPI000377F707
SCNpilot_cont_500_bf_scaffold_341_122
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131044..131409)
DNA (366bp) protein (122aa)
ATP-dependent Clp protease ClpS n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000368E38D
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
SCNpilot_cont_500_bf_scaffold_341_123
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131550..132299)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037DAA85
Sphingomonas taxi strain 30a NODE_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26525.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
phasin family protein
SCNpilot_cont_500_bf_scaffold_341_124
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132418..134163)
DNA (1746bp) protein (582aa)
poly(R)-hydroxyalkanoic acid synthase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD523 rbh
Poly(R)-hydroxyalkanoic acid synthase {ECO:0000313|EMBL:AIT07272.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
polyhydroxyalkanoate synthase rbh
SCNpilot_cont_500_bf_scaffold_341_125
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134318..135526
DNA (1209bp) protein (403aa)
putative aminotransferase (EC:2.6.1.-); K14261 alanine-synthesizing transaminase [EC:2.6.1.-]
aminotransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003670A76
Aminotransferase class I and II family protein {ECO:0000313|EMBL:EZP49238.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
SCNpilot_cont_500_bf_scaffold_341_126
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135591..136373
DNA (783bp) protein (261aa)
membrane protein n=1 Tax=Sphingomonas RepID=UPI0002893FAD rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO39936.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
sulfate permease
SCNpilot_cont_500_bf_scaffold_341_127
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136378..136785
DNA (408bp) protein (136aa)
aldehyde-activating protein n=1 Tax=Methyloferula stellata RepID=UPI00036BC1FA
glutathione-dependent formaldehyde-activating protein
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:ACK49305.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_500_bf_scaffold_341_128
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136754..137284
DNA (531bp) protein (177aa)
thioesterase protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD520
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:KHA63605.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
SCNpilot_cont_500_bf_scaffold_341_129
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137296..138909)
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000374E89B rbh
Sphingomonas taxi strain 30a NODE_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29025.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_341_130
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139019..140572)
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036DCF0F rbh
Protease {ECO:0000313|EMBL:AIT06374.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
protease Do rbh
SCNpilot_cont_500_bf_scaffold_341_131
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140683..141339)
DNA (657bp) protein (219aa)
hypothetical protein; K04087 membrane protease subunit HflC [EC:3.4.-.-]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003752607 rbh
Membrane protease subunit HflC {ECO:0000313|EMBL:AIT06375.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_500_bf_scaffold_341_132
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141475..142554)
DNA (1080bp) protein (360aa)
hflK; HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-] rbh
peptidase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6C49C
HflK protein {ECO:0000313|EMBL:GAN13328.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_500_bf_scaffold_341_133
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142625..143584
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035DB7AF
Sphingomonas taxi strain 30a NODE_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29029.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
ATPase
SCNpilot_cont_500_bf_scaffold_341_134
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143656..144084
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDC3A
CoA-binding domain-containing protein {ECO:0000313|EMBL:EZP54859.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
CoA-binding domain-containing protein
SCNpilot_cont_500_bf_scaffold_341_135
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

144170..145483
DNA (1314bp) protein (438aa)
C4-dicarboxylate ABC transporter n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031DF3CD rbh
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
sodium:dicarboxylate symporter; K11103 aerobic C4-dicarboxylate transport protein rbh
SCNpilot_cont_500_bf_scaffold_341_136
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145453..145770)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D56121
Uncharacterized protein {ECO:0000313|EMBL:KHA64839.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
type IV pilus assembly PilZ
SCNpilot_cont_500_bf_scaffold_341_137
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145858..147009)
DNA (1152bp) protein (384aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
tyrosyl-tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Sphingomonas sp. S17 RepID=F3WS96_9SPHN
SCNpilot_cont_500_bf_scaffold_341_138
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147033..148097)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003784AC7
Peptidase M23 family protein {ECO:0000313|EMBL:GAL99550.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
peptidase M23B
SCNpilot_cont_500_bf_scaffold_341_139
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148111..148872)
DNA (762bp) protein (254aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
surE; 5'-nucleotidase (EC:3.1.3.2); K03787 5'-nucleotidase [EC:3.1.3.5]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003669826
SCNpilot_cont_500_bf_scaffold_341_140
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148872..150149)
DNA (1278bp) protein (426aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176, ECO:0000313|EMBL:AJP72004.1}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176, ECO:0000313|EMBL:AJP72004.1};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
seryl-tRNA ligase (EC:6.1.1.11)
seryl-tRNA synthetase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4E6D9 rbh
SCNpilot_cont_500_bf_scaffold_341_141
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150255..150695
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IST5_9SPHN
Host attachment protein {ECO:0000313|EMBL:AJP72003.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_341_142
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150940..151770
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCAA1
Uncharacterized protein {ECO:0000313|EMBL:KGB55292.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_341_143
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152118..152579
DNA (462bp) protein (154aa)
molecular chaperone DnaK n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035CF075
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein
SCNpilot_cont_500_bf_scaffold_341_144
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152646..152969
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037073F9
PilZ domain protein {ECO:0000313|EMBL:AJP72001.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_341_145
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152992..153453)
DNA (462bp) protein (154aa)
Transcriptional regulator, MarR family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RML0_9PROT
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFH11460.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
MarR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_341_146
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153502..154719)
DNA (1218bp) protein (406aa)
FMN-dependent alpha-hydroxy acid dehydrogenase; K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] rbh
UPI0003D1B8D4 related cluster n=1 Tax=unknown RepID=UPI0003D1B8D4 rbh
Contig17, whole genome shotgun sequence {ECO:0000313|EMBL:ETA49998.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
SCNpilot_cont_500_bf_scaffold_341_147
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

154770..156707
DNA (1938bp) protein (646aa)
polyvinyl-alcohol dehydrogenase (EC:1.1.2.6); K05889 polyvinyl alcohol dehydrogenase (cytochrome) [EC:1.1.2.6] rbh
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0H524_9SPHN rbh
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
SCNpilot_cont_500_bf_scaffold_341_148
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156840..158549)
DNA (1710bp) protein (570aa)
acetolactate synthase I/II/III large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Possible thiamine pyrophosphate enzyme n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YIT6_MOBAS
Possible thiamine pyrophosphate enzyme {ECO:0000313|EMBL:EAS50031.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
SCNpilot_cont_500_bf_scaffold_341_149
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158595..160040)
DNA (1446bp) protein (482aa)
Vanillin dehydrogenase {ECO:0000313|EMBL:CDX15851.1}; EC=1.2.1.67 {ECO:0000313|EMBL:CDX15851.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Salicylaldehyde dehydrogenase n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G702_9RHIZ
vdh; vanillin: NAD oxidoreductase
SCNpilot_cont_500_bf_scaffold_341_150
Hyphomonas sp. BRH_c22, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160043..161410)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J261_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS38384.1}; TaxID=1629710 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. BRH_c22.;"
major facilitator superfamily transporter rbh
Displaying items 121-150 of 176 in total

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