ggKbase home page

SCNpilot_cont_500_bf_scaffold_133

Search features with annotation key words

Displaying items 31-60 of 144 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_133_31
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24717..24950
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KFB08129.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
SCNpilot_cont_500_bf_scaffold_133_32
Komagataeibacter intermedius, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24952..26208)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Gluconobacter oxydans H24 RepID=K7SR88_GLUOY rbh
Type II restriction enzyme {ECO:0000313|EMBL:KIE60360.1}; TaxID=1458464 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter intermedius AF2.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_133_33
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26355..26570
DNA (216bp) protein (72aa)
Succinate-semialdehyde dehdyrogenase {ECO:0000313|EMBL:ESY63102.1}; EC=1.2.1.16 {ECO:0000313|EMBL:ESY63102.1};; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
succinic semialdehyde dehydrogenase (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
UPI0003CE070A related cluster n=1 Tax=unknown RepID=UPI0003CE070A
SCNpilot_cont_500_bf_scaffold_133_34
unknown

Not on your lists

26583..26849
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_133_35
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27265..27648
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6H1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12661.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_cont_500_bf_scaffold_133_36
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27799..28362
DNA (564bp) protein (188aa)
YVTN beta-propeller repeat-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUJ7_9RHIZ
YVTN beta-propeller repeat-containing protein {ECO:0000313|EMBL:EHK55597.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
YVTN beta-propeller repeat-containing protein
SCNpilot_cont_500_bf_scaffold_133_37
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28375..28653
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6G9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12659.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_cont_500_bf_scaffold_133_38
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28972..30405
DNA (1434bp) protein (478aa)
Multicopper oxidase, type 2 n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUJ3_9RHIZ rbh
Multicopper oxidase, type 2 {ECO:0000313|EMBL:EHK55593.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
multicopper oxidase, type 2 rbh
SCNpilot_cont_500_bf_scaffold_133_39
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30486..32909
DNA (2424bp) protein (808aa)
Lead, cadmium, zinc and mercury transporting ATPase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6G4_9RHIZ rbh
Lead, cadmium, zinc and mercury transporting ATPase {ECO:0000313|EMBL:EHH12654.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
copper-translocating P-type ATPase
SCNpilot_cont_500_bf_scaffold_133_40
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32906..33235
DNA (330bp) protein (110aa)
Major facilitator superfamily permease n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUJ0_9RHIZ
Major facilitator superfamily permease {ECO:0000313|EMBL:EHK55604.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_133_41
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33386..34771
DNA (1386bp) protein (462aa)
Beta-lactamase domain-containing protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JDF9_9RHOB rbh
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EKE68599.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter baekdonensis B30.;"
beta-lactamase domain-containing protein; K07576 metallo-beta-lactamase family protein rbh
SCNpilot_cont_500_bf_scaffold_133_42
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34768..36279
DNA (1512bp) protein (504aa)
Putative thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_00703}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_00703};; TdRPase {ECO:0000256|HAMAP-Rule:MF_00703}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
thymidine phosphorylase (EC:2.4.2.4) rbh
Putative thymidine phosphorylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMB4_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_133_43
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36276..37187
DNA (912bp) protein (304aa)
Phosphoribosylpyrophosphate synthetase {ECO:0000313|EMBL:KGM56288.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KGM56288.1};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] rbh
Phosphoribosylpyrophosphate synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMB5_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_133_44
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37240..37524
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Pseudomonas RepID=UPI0003821A38
PA-phosphatase-like phosphoesterase
Putative membrane-associated protein {ECO:0000313|EMBL:EJB03372.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
SCNpilot_cont_500_bf_scaffold_133_45
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37644..39278
DNA (1635bp) protein (545aa)
hypothetical protein n=1 Tax=Pseudomonas RepID=UPI0003821A38
Putative membrane-associated protein {ECO:0000313|EMBL:EJB03372.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
PA-phosphatase-like phosphoesterase
SCNpilot_cont_500_bf_scaffold_133_46
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39542..40669)
DNA (1128bp) protein (376aa)
ABC-2 type transporter n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPW0_XANP2 rbh
ABC-2 type transporter; K09686 antibiotic transport system permease protein rbh
ABC-2 type transporter {ECO:0000313|EMBL:ABS70056.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_133_47
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40672..43452)
DNA (2781bp) protein (927aa)
ABC transporter related n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPW1_XANP2 rbh
ABC transporter related {ECO:0000313|EMBL:ABS70057.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
ABC transporter related; K13926 ribosome-dependent ATPase rbh
SCNpilot_cont_500_bf_scaffold_133_48
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43442..44428)
DNA (987bp) protein (329aa)
Secretion protein HlyD family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPW2_XANP2 rbh
secretion protein HlyD family protein; K01993 HlyD family secretion protein rbh
Secretion protein HlyD family protein {ECO:0000313|EMBL:ABS70058.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_133_49
unknown

Not on your lists

44744..45253
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_133_50
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45093..46454)
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6F9_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12649.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_133_51
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46479..47117)
DNA (639bp) protein (213aa)
Signal-transduction protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6F8_9RHIZ rbh
Signal-transduction protein {ECO:0000313|EMBL:EHH12648.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
putative CBS domain protein
SCNpilot_cont_500_bf_scaffold_133_52
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47430..48128
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFE4_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EHJ59989.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_133_53
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48278..49714)
DNA (1437bp) protein (479aa)
cardiolipin synthetase 2; K06131 cardiolipin synthase [EC:2.7.8.-] rbh
Cardiolipin synthetase 2 n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I190_9RHIZ rbh
Cardiolipin synthetase 2 {ECO:0000313|EMBL:EHK53252.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_133_54
unknown

Not on your lists

50212..50553
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_133_55
Burkholderia sp. KJ006, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50694..51410)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. KJ006 RepID=I2DZ15_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ89891.1}; TaxID=416344 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. KJ006.;"
SCNpilot_cont_500_bf_scaffold_133_56
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51680..53281)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=2 Tax=Rhizobium fredii RepID=G9ADA7_RHIFH rbh
ubiB; putative ubiquinone biosynthesis protein UbiB rbh
Putative ubiquinone biosynthesis protein UbiB {ECO:0000313|EMBL:AFL54873.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_500_bf_scaffold_133_57
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53424..54539)
DNA (1116bp) protein (372aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUP9_9RHIZ
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:EHK55539.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
YVTN beta-propeller repeat-containing protein
SCNpilot_cont_500_bf_scaffold_133_58
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55164..55715)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BI6_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG65239.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_133_59
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55859..57748)
DNA (1890bp) protein (630aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; Flags: Precursor;; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
FtsH-2 peptidase (EC:3.6.4.6); K03798 cell division protease FtsH [EC:3.4.24.-] rbh
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IN66_9BURK rbh
SCNpilot_cont_500_bf_scaffold_133_60
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57761..58435)
DNA (675bp) protein (225aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPZ9_XANP2 rbh
isoprenylcysteine carboxyl methyltransferase rbh
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ABS70095.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Displaying items 31-60 of 144 in total

View Taxonomy