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SCNpilot_cont_500_bf_scaffold_133_127

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: 129021..129347

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirB3 family protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A598_RHILW similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 101.0
  • Bit_score: 142
  • Evalue 2.90e-31
Type VI secretion protein {ECO:0000313|EMBL:KJF65665.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 108.0
  • Bit_score: 147
  • Evalue 9.80e-33
type IV secretory pathway VirB3 family protein; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 101.0
  • Bit_score: 142
  • Evalue 9.30e-32

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Taxonomy

Rhizobium nepotum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGGTGGAACGTTACAGGGAAAGCGACGTCGGTGACGATCACGTCAAGACCTATCCGGTGATCCTCGCGTTGACGAGGCCACCGACCATCCTCGGCATTCCGTACCTCTATGTGTGCGCGGAAGGATTCATTGCGGTCATGGCCTACCTGTTTCTTGGGTCGATCCTGTGGCTGCCGTCGACCGCGCTGGTCCTTCATGCATTCTTTTACGTGGCGTGCGTGAAGGGCGATCTGTGGTTCTTCGACATCCTGATGAAGACATCGCTTTGCGGTGTGAACCCCGTCGGCCGCCGGCTCGGCGGCGGCTTAAAGACGTATGGTGCCTAG
PROTEIN sequence
Length: 109
MVERYRESDVGDDHVKTYPVILALTRPPTILGIPYLYVCAEGFIAVMAYLFLGSILWLPSTALVLHAFFYVACVKGDLWFFDILMKTSLCGVNPVGRRLGGGLKTYGA*