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SCNpilot_cont_500_bf_scaffold_133_137

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: 139104..141785

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirD4 component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0GXI6_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 894.0
  • Bit_score: 766
  • Evalue 3.40e-218
  • rbh
Type IV secretory pathway, VirD4 component {ECO:0000313|EMBL:EJB02320.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 894.0
  • Bit_score: 766
  • Evalue 4.80e-218
TRAG family protein similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 894.0
  • Bit_score: 744
  • Evalue 3.30e-212
  • rbh

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2682
ATGGCAATCGCAAGCACGCCGTCTGACGGCAGCTCAGGCCGCGAACGCGGCGGCTTTCGCAGCCGAGTCGATCTGCCTGGACGATGGTCATGGCTGCGCCGGCAGTCCTTCTTCACCTTTCCGATTGCACTCGCCGCGATGTTCGCTGTCTGGTGCGTGACCTTCGTTGTTCTGTACGACGCCCATGTCGGCAGTGCCGGCAATTCCGCCTTCATCGACTGGCTGGCCCAGGCGCCACCCGCGACTGCGTTGAAACAGATCCTCGTCACTGCCGCGATGCGCGAGGCGAGAGGCATCGTCATCTTCGCCGCGGTGCTGGCATCGCCGGTTCTCTTCGTTATCCTTGCGCTCTGGATGCTGAAGGCCGGCCGGGGCTGGTCGCGCATCCTGCTTTATCTCGTGAACATCCGCTCCGGACGGCGCGTGGCGATCTATGCCTTCATCGCCGTCATGATGGTCGTCGTCGCGACGATCGCGTATTTCGCGGTGTTCTACATGGCCGCCACGAAGTTCGAGGAGCGGCGACAGCTGGCAGCGTATTTCTCCGACCGGCCGCTTGCGATGACGACGGCGCCGTTCGGAACCACGTCGCCTACAGGCAAGGTCCTGACCGCCGATCGCCAGCTTCGCATGGCTGCTCTGGCCGGTCTGGCGGCCGCGTTGGCATTGATCGGCCTGCCGGTTGGTGTCGCGGTGCACAAACGAAGCCGAATGGTTCATGGTACCGGCCGGCTGGGCGATATGACCGACGCGGCCGACTTCGGCCTGCGGTCGAAGCGCGGCATCGTGCTCGGCATGAAGCAGGGCATGCTGATCATCGACGACAGCGACCGGCATGTGACGGTGCTGGGCACGCCGGGATCGAATAAGTCGCGTGGCCTGGTCATTCCTTCGATTATGCGGTTCGGCGGCTCGATGTTCGTGCTCGACTTCGGTGGCGAGCTCTACAAGGACACCTCCGGCTGGCTGAAGGCGAACGGCTATCAGGTCTATCTGGTCGCGCCGGGCGAACCAGACACCGACGCCTTCAACCCGCTCGATTTCGTCAGCGCGGACCCGGCGCGACGGGTCACGGATCTGCAGAAGCTGTCGCTGATGCTGATGCCGGAGCGCATCCGCTCCGATGCCAGCGACTTCTGGGAAGAGAGCGCGCGCATCCTGCTGACGGCACTGCTGGCCTTCGTTATCGAATGCCCGGATACCCGCAATACGCTTGGCGAGCTCTATCGCATCCTGGGGTCCATGCCGGACGAGCGCACGGCAATCACCCAGCTGATGGAGAGGTACGAGAAAGTGCTCTCCGACACGACGCGCATTCAGCTGGAAAAATTCCGTGGCCGGCATGAAAAGCTGGGCGAGGGCATTGCCGCCGAGATTGCCGCAAAGATCGATCAGCTGGCCAACACCAATCTCGAGGCGTTCTTGTCGACCACGACAATCCCGTTGCGCGATATCCGCAAGCGAAAGATCGCGATTTTCCTAAAAGTCGACGTCCAGACCATCCGCATCTACGAGCGCTACATCGCGCTGATCATCGAGCAGATGGTCGACGTCTTTCTGAAGGAAGGGCCGCTGCGCGACAACCAACACGACGTGATGATGATGCTCGACGAGTTCGGCAACGCCGGACGCATGGAAGCGATCATGACGCAGGCGCCGCTGATGCGTAAATACGGCATCCGCTTCGTGTCGATCCTGCAAGACAGCGCGCAAGTCGAGCGGCTTTACGAACGGACCGGCCGTGACATCCTGCTGAACTCGTCGGCGATCAAGCTCTATATGAACTTCCAGAATCCGGCCGACGCCGAATATGTGTCGAAGTTCGCGGGCAGGCGGACCGAGTGGCTTCCGACCTCGTCCTATACCTATCGCCACGGCCGCCGCGACCGGCAGGAGTCGAGGACACCGCTCGGCATCGATGTCCTACCCGTCAGCGAATTGCTGGCAATGAAGCCCGAGGAAGCGATCCTGCAGGTGCAGGGTGCGCCAATTTTCAGGGTGCTCAAGCTCGACGCTGGCCAGTCGGTCCATTTCAAGGCGTACCAGACATATCAACCTTTGCCTGCACCGAAGCTGAACATCGTGTTCAGCGAGGGTGTCGCAAACCCGCCGACGCCGGCGGGCGAGGGGACGACGGTCCATCTGTCGACCTTGGACGGGCTAAAAAAGCGGCTGGGTCTGGACGCGTTGCGCGAGACAGGCGTCGCGAGGCCTGATCAAAAAGACCGAGGCAGGCAAGGCACAGCCGCGCCGCCGGACGACACAACCGCGAAATCGGAAGACACTGACGGCAAACGCCAAGGGACCGCCGACGACGTTGACGCACTGATCGACCGCCAAGTTTTGGCTGATGTCGTCTGGGAAGGCAGCACACAGGGCCGTGGCGCTCGCGACCGAGTGCGGGCCCGCGAGGCGGCAATATCCGACGACACGCGTCGCTCTCCGATCCTGAAGCGCCAGGAAGTCAGCACGGCATTTGGTCCGGATGGGGCAGCGTTCCCGCTGGAGGAAGGCTTTTTCGACGGTTCCATCCAGCCGGAGAACACGGATCCTCGGGACATCAATGAGCCTTTGGATTGGATCATGGCGGAGATCAGACGCCGATCTCCGCCGCAAGCCAGGGACGCTGTGGAGGAACTCCACGTGGCAGTGTCCGATCCACTCGAGGAGGGGACGAGATGA
PROTEIN sequence
Length: 894
MAIASTPSDGSSGRERGGFRSRVDLPGRWSWLRRQSFFTFPIALAAMFAVWCVTFVVLYDAHVGSAGNSAFIDWLAQAPPATALKQILVTAAMREARGIVIFAAVLASPVLFVILALWMLKAGRGWSRILLYLVNIRSGRRVAIYAFIAVMMVVVATIAYFAVFYMAATKFEERRQLAAYFSDRPLAMTTAPFGTTSPTGKVLTADRQLRMAALAGLAAALALIGLPVGVAVHKRSRMVHGTGRLGDMTDAADFGLRSKRGIVLGMKQGMLIIDDSDRHVTVLGTPGSNKSRGLVIPSIMRFGGSMFVLDFGGELYKDTSGWLKANGYQVYLVAPGEPDTDAFNPLDFVSADPARRVTDLQKLSLMLMPERIRSDASDFWEESARILLTALLAFVIECPDTRNTLGELYRILGSMPDERTAITQLMERYEKVLSDTTRIQLEKFRGRHEKLGEGIAAEIAAKIDQLANTNLEAFLSTTTIPLRDIRKRKIAIFLKVDVQTIRIYERYIALIIEQMVDVFLKEGPLRDNQHDVMMMLDEFGNAGRMEAIMTQAPLMRKYGIRFVSILQDSAQVERLYERTGRDILLNSSAIKLYMNFQNPADAEYVSKFAGRRTEWLPTSSYTYRHGRRDRQESRTPLGIDVLPVSELLAMKPEEAILQVQGAPIFRVLKLDAGQSVHFKAYQTYQPLPAPKLNIVFSEGVANPPTPAGEGTTVHLSTLDGLKKRLGLDALRETGVARPDQKDRGRQGTAAPPDDTTAKSEDTDGKRQGTADDVDALIDRQVLADVVWEGSTQGRGARDRVRAREAAISDDTRRSPILKRQEVSTAFGPDGAAFPLEEGFFDGSIQPENTDPRDINEPLDWIMAEIRRRSPPQARDAVEELHVAVSDPLEEGTR*