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SCNpilot_cont_500_bf_scaffold_866_15

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: 15003..15248

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=13 Tax=Mesorhizobium RepID=HFQ_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 81.0
  • Bit_score: 163
  • Evalue 9.30e-38
RNA chaperone Hfq; K03666 host factor-I protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 81.0
  • Bit_score: 163
  • Evalue 2.90e-38
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 81.0
  • Bit_score: 163
  • Evalue 1.30e-37

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Taxonomy

Mesorhizobium sp. LNHC232B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGGCGGAACGATCGCAAAATCTTCAGGACCTGTTCCTGAATTCAGTTCGCAAGAGCAAGAACCCACTCACCATTTTTCTCATCAACGGCGTAAAGCTGACCGGCGTGGTCACTTCGTTTGACAATTTCTGCGTCCTGCTGCGCCGAGACGGCCACTCCCAGCTCGTCTACAAGCACGCCATTTCCACGATCATGCCGAGCCAGCCGGTTCAGATGTTCGATGGCGAGGAAAGCCAGGGCGCCTGA
PROTEIN sequence
Length: 82
MAERSQNLQDLFLNSVRKSKNPLTIFLINGVKLTGVVTSFDNFCVLLRRDGHSQLVYKHAISTIMPSQPVQMFDGEESQGA*