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SCNpilot_cont_500_bf_scaffold_866_23

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(22436..22780)

Top 3 Functional Annotations

Value Algorithm Source
Small multidrug resistance protein n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KCW9_METEX similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 114.0
  • Bit_score: 158
  • Evalue 5.50e-36
Small multidrug resistance protein {ECO:0000313|EMBL:EHP94656.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 114.0
  • Bit_score: 158
  • Evalue 7.70e-36
emrE; small multidrug efflux pump, DMT superfamily; K03297 small multidrug resistance protein, SMR family similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 114.0
  • Bit_score: 154
  • Evalue 2.50e-35

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Taxonomy

Methylobacterium extorquens → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGAAACCCCTCGTCCTCGGATACGGCGCCCTCGCCCTGGCCATCATCTGCGAGGTCACCGGGTCAGCCTTCCTGCTACGCTCGGAGCAATTCACGCGGCTGGTGCCAACGCTGGCGATGGGCGCGTTCTACGCGGTGGCGTTCTTTTTCCTGTCCCAGGCGCTCAGGATGATCCCGCTCGGCGTGGCCTACGCGATCTGGGCCGGTCTCGGCATCGTGCTGACCGCCGCCGTGGGCGTCGTGGTGTTCCGCCAGTCGCTCGACACGCCTGCCTTCCTCGGCATCGCGCTGATTGTCAGCGGCGTCGTGGTCATGCAAACCTTCTCCAGCAGCTCAGGGCATTGA
PROTEIN sequence
Length: 115
MKPLVLGYGALALAIICEVTGSAFLLRSEQFTRLVPTLAMGAFYAVAFFFLSQALRMIPLGVAYAIWAGLGIVLTAAVGVVVFRQSLDTPAFLGIALIVSGVVVMQTFSSSSGH*