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SCNpilot_cont_500_bf_scaffold_1555_26

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: 24128..25846

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding transcriptional activator of the SARP family n=1 Tax=Rhizobium sp. CF142 RepID=J2L6L1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 569.0
  • Bit_score: 762
  • Evalue 3.20e-217
  • rbh
DNA-binding transcriptional activator of the SARP family {ECO:0000313|EMBL:EJJ28674.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 569.0
  • Bit_score: 762
  • Evalue 4.40e-217
regulatory protein similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 570.0
  • Bit_score: 752
  • Evalue 1.30e-214
  • rbh

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1719
ATGCGCGTTTCGATCCACCTGCTTGGCCGTTTCGCGGTCAGCGTCGACGGTCGTGACGTACCGGCGGCCGATTGGCGGCGCGACCGCGCCGCGGCGCTGGTCAAGCTGCTGGCGCTGTCGCCCGGCCATCGCATTCATCGCGAGCAGGCCATGGAACGGTTCTGGCCGGACGCCGACCCGGAAGCGGCGGGCGCCAGCCTGCGCAAGGCGATCCATTTCGCGCGCCGCGCACTCGGCGCGCACGAGCTGATCGAACTCAGGAACGATATCGTGTCGTTCGGCCCGCAAGCGGAGCTGGAGATCGACACCGAGAGCTTCGAGGCCGCCGCCAAAGCGGCGCTGCGCGGACACGGCAACGACGTCCGGGAAGGAAGCGACCATGAACGCGCCGCCGACCTCTATGGCGGCCGGCTGCTGCCGGACGACGTGTTCGTGGAATGGCTGGAGGCGCCGCGCGAGCAGTTGCGCCAGCGCTACAGCGACGTGCTGCGCGCTGGCGGGCTGTGGCAGCGGCTGATCGCGCTCGACCCCGCCGACGAGCAGGCGCAATGCGCGCTGATGCAGGCGGCGCTCGACGCCGGCAACCGCGTCGAGGCGATCCGCCAGTTCAACCAGCTTCGCGACAATCTGCACGCCGAGCTTGGGGTCGGCCCGAGCGCGGCCACCATAGCGCTCTACGAAAGGGCGCTTGCGCTTTCCAGCACCGAGACCGTCAGCTCCTCGGAGCGCGTGCGCACGGCGCTGGCCTGGGGACTTGTGCACCTGCAGAGCGGCGCGTTCGACAAGGCGAGCGATATCGCCCGCGAGACACGCGACCTGGCGCTAGGCGCCGACCTGCCGCGCGAGGTGGGTGAGGCGAGCGCGCTGCTCGGCCTGTCGTCGATGATGCGGGCGCAGTGGCCACAACTCTTCCGCTCGGAATTCATCGAGTGGGTGCGCGCCAGGCCTGCCTTCGTGAAGCATGTCTTCGACGGCCATCTGTGCCTGTCCGAATTCTGCCTGTGCAGCGCCAAGGGTCATGCCGAGGTGGCGGGGCTGGCGAGGGAGCTCCTGTCCGTCGCAGAGGAGGCGGGATCGGTGGCGGGGCGGGGCCTTGCCTGCCTGCTCCTGGGCGAAGCGGCGCTGTTTTCGGGCGAGCTCGACGAGGCGGAAGACTATCTCGGCGAGGCCGAACGGCTGCTGTTGGAGGCCGACGCGGTGGCGGGCCGGGTGCTGGCCATCGAGCGGCTGGCGGAGATCGCGCTGGAGCGCGGCCAGAAATGGCGCGCCGGCCGGCTGATACAGCGCGGGCTCGCGGATGCCGAGCGCTCGTGGCTGTCGCCGCATCTCATCATGCGCATGCAGGCGCTGGCGGTTCGCGCGGCCGCGACGCCGAAGATGGTGGCGGAGGAGATTCTGGCCGGCGACAGGCTGATGACGCCCGGCGCCTGCCAACCTTGCTCGATGGCGCTGCGCACCGCCTCGGCTATCGCGCTCGCCGAGGCCGGCAAGCTGGAAGAGGTCGACCACCGGCTGAACGAGGCCGAGCGCATCGCCGGCATGTGGCATGGCGGGCCGTGGGCCGCGGCGCTGTGGGAGGCGCGCGGCGTGCAGCGACGCGCGCAGAAGAAGGAAGTGCGCGCGCTGGCCGCCTTCGAGGAGGCCGCCTCGCGCTACGAGGAGCTCGGCCGGCCCCGCGACCAGGCCCGCTGCCTTGCGCGCATGGGCCCCGAGGGGTAG
PROTEIN sequence
Length: 573
MRVSIHLLGRFAVSVDGRDVPAADWRRDRAAALVKLLALSPGHRIHREQAMERFWPDADPEAAGASLRKAIHFARRALGAHELIELRNDIVSFGPQAELEIDTESFEAAAKAALRGHGNDVREGSDHERAADLYGGRLLPDDVFVEWLEAPREQLRQRYSDVLRAGGLWQRLIALDPADEQAQCALMQAALDAGNRVEAIRQFNQLRDNLHAELGVGPSAATIALYERALALSSTETVSSSERVRTALAWGLVHLQSGAFDKASDIARETRDLALGADLPREVGEASALLGLSSMMRAQWPQLFRSEFIEWVRARPAFVKHVFDGHLCLSEFCLCSAKGHAEVAGLARELLSVAEEAGSVAGRGLACLLLGEAALFSGELDEAEDYLGEAERLLLEADAVAGRVLAIERLAEIALERGQKWRAGRLIQRGLADAERSWLSPHLIMRMQALAVRAAATPKMVAEEILAGDRLMTPGACQPCSMALRTASAIALAEAGKLEEVDHRLNEAERIAGMWHGGPWAAALWEARGVQRRAQKKEVRALAAFEEAASRYEELGRPRDQARCLARMGPEG*