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SCNpilot_cont_500_bf_scaffold_1973_10

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(15081..16226)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE5A98 related cluster n=1 Tax=unknown RepID=UPI0003CE5A98 similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 380.0
  • Bit_score: 498
  • Evalue 4.30e-138
  • rbh
RND family efflux transporter MFP subunit (Modular protein) {ECO:0000313|EMBL:CDX44906.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 384.0
  • Bit_score: 522
  • Evalue 5.10e-145
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 373.0
  • Bit_score: 240
  • Evalue 6.70e-61

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
ATGACCGTAAGATCGCGTAAAACCTATGTTGTGCTGGCGGCGGTGGTCGTGCTGGCCGCCATGGCCGTGCTTAAGGCCTATGGCCGGAGCTCGACCGAGCCCGCAGCGCGGACGCCGGCCACGCCGGCCGTCACGCTGACGGTCTCCGTCGAAAAGGCGCGATCCGAGACCGCCATGTCCTCGATCAGCGCCACTGGCACGGTCTCCGCCTGGCAGGAGGCAACTGTCGGCGCGGAGGAGAGCGGGCTGCGGCTGACCGATATGCTGGTGAGCGAAGGCGACAAGGTGCGGAGCGGTGACGTCGTCGCGCGGCTCGACGGTTCGTTGCTGAAGGCACAGCTTGCCGAGCAGCAGGCCGCCGTCACGCAGGCCGAAGCGACGCTGGAGGGCGCCGTATCGGCTGCCGCCCGCGCCCAGAAGCTGCTGGCGAGCAACGCCGTAAGCGCGGAGACCGCGGAGGAAAGGACAACAGCCGTCAAGACAGGCAGGGCCCAGCTCGACCAGGCCAAGGCTGTGGTCGACCGGCTGAGCGCCGAGCTCGAGCGGACGACCATACGCGCGCCATTCGACGGCATCGTCTCCAGCCGGCCGGCGGTGGCCGGCTCGATCGTCCAGGCCGGTACGGAACTGATGAAGATCATCCGCGAGGGCAGGCTGGAGGTCGGCGTTCTCGTGCCCGAAAAGGACCTGCCGGACGTCTCCGTCGGTCAGGCGGCGACTGTCGTCGATGCATCTGGCCGGACTTTTTCCGGCACCGTTTCCTCGATCGCCCAGACGGTGAACTCGACGACGCGGCTTGCCACGGTCTATGTCGCGCTCGGCGAGGGATCGGGATTGAAGCCCGGCATGTTCGCCCGCGTCGCGATCGCCGGAGCGACCTCGCGGCAGTTGAGCGTCGCCGAGGCCGCGCTCGTCTGGCAGGGCGGCAAGCCCGCCGTCTTCGTCGTGGACGCCGCCGGCAAGGCGGTCATGCGCCCGGTGTCGACCGGCGCGCACCGTGACGGCCGTGTGGTCATCGAGAGCGGGCTGTCGGAAGGTGATGATGTGGTGGTCGCCGGCGCGGGCTTCCTCAGCGACGGCAATCTCGTGCGCGTCGCCGCAGGCAACGATGCCGACGGCGCACACGAGGTGGAGGCGGCGCGATGA
PROTEIN sequence
Length: 382
MTVRSRKTYVVLAAVVVLAAMAVLKAYGRSSTEPAARTPATPAVTLTVSVEKARSETAMSSISATGTVSAWQEATVGAEESGLRLTDMLVSEGDKVRSGDVVARLDGSLLKAQLAEQQAAVTQAEATLEGAVSAAARAQKLLASNAVSAETAEERTTAVKTGRAQLDQAKAVVDRLSAELERTTIRAPFDGIVSSRPAVAGSIVQAGTELMKIIREGRLEVGVLVPEKDLPDVSVGQAATVVDASGRTFSGTVSSIAQTVNSTTRLATVYVALGEGSGLKPGMFARVAIAGATSRQLSVAEAALVWQGGKPAVFVVDAAGKAVMRPVSTGAHRDGRVVIESGLSEGDDVVVAGAGFLSDGNLVRVAAGNDADGAHEVEAAR*