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SCNpilot_cont_500_bf_scaffold_3206_9

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(7382..8008)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Mesorhizobium RepID=V7H9R8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 208.0
  • Bit_score: 382
  • Evalue 3.20e-103
  • rbh
RNA polymerase sigma factor {ECO:0000313|EMBL:ESZ47336.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 208.0
  • Bit_score: 382
  • Evalue 4.50e-103
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 188.0
  • Bit_score: 351
  • Evalue 1.50e-94

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Taxonomy

Mesorhizobium sp. L103C131B0 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGAACCTTTTTGGACCGATCGGCGACAAAGCGGACGAGAGCCAGGCGGCTCAACCGGCCATGAGCGCAGCGATCGACACCGATCGCGCGCTGGTGGAACGGGTCGCGAAGGGCGACCGGGCCGCCGTGCGGCTCCTGTTCATGCGTCACCACGCGCGGGTCTACCGCTTCGTGGCGCGCCAGACGGGATCGGAAATGATGGCCGACGACATCGCAAACGAGGTTTTCCTCGAATTGTGGAAGCAGGCGCCGAACTTCGAGGGCCGCTCGGAGGTGTCGACCTGGCTGCTCGGCATCGCCCGATTCAAGGCGCTGTCGATGCTGCGCAGGAAGAAGGAGGACTGGATCGACGACGAGGCCGCCGCCGCGGTGCCTGACAGCGCCGATACGCCTGAAGTCGCCACCATGAAGGAAGACAAGGGCGCCGCGCTCCGGCGCTGTGTCGACGCCCTGCCGGAAGAGCATCGCGTCGTCATCGACCTCGCCTATTACCACGGACAATCGGTGACCGAGATCGGCGAGGTGCTCGGCATCCCGGTGGCGACCGTCAAGACCAGGATGTTCTACGCCCGCAAGAAACTTGGCGAGGCCCTCAAGGCCGCCGGTTACGACAGGGGATGGCCATGA
PROTEIN sequence
Length: 209
MNLFGPIGDKADESQAAQPAMSAAIDTDRALVERVAKGDRAAVRLLFMRHHARVYRFVARQTGSEMMADDIANEVFLELWKQAPNFEGRSEVSTWLLGIARFKALSMLRRKKEDWIDDEAAAAVPDSADTPEVATMKEDKGAALRRCVDALPEEHRVVIDLAYYHGQSVTEIGEVLGIPVATVKTRMFYARKKLGEALKAAGYDRGWP*